PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026401576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 567aa MW: 63987.5 Da PI: 6.7023 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.2 | 7.8e-28 | 318 | 371 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +++Wt++LH+rFv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYRl XP_026401576.1 318 KMKVDWTQDLHKRFVKAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRL 371 5689*****************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 43 | 1e-13 | 321 | 370 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+++++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_026401576.1 321 VDWTQDLHKRFVKAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 370 57***********************************************7 PP | |||||||
3 | Response_reg | 29.8 | 3.1e-11 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealka 92 +l+ d++ + ++ le+ +y +v ++ d ea+e l +k +++ ++ ++ + + +k +++++ +lp i+++++ +++ +++ + XP_026401576.1 20 ILLLDEDIHSAAEIKLKLEQMDY-IVSAFCDENEAMEALSNKCesYHVAIVEVSTGNnLG---SFKFLENAK-DLPTIMISSTHCVSTTMKCIAL 109 68888888999999999******.***************877767*****9988877344...455565655.8********************* PP TESEEEESS--HHHHHH CS Response_reg 93 GakdflsKpfdpeelvk 109 Ga +fl Kp ++e+l++ XP_026401576.1 110 GAAEFLQKPLSEEKLRN 126 **************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence |
MVCTTDDLLE WKDFPKGLRI LLLDEDIHSA AEIKLKLEQM DYIVSAFCDE NEAMEALSNK 60 CESYHVAIVE VSTGNNLGSF KFLENAKDLP TIMISSTHCV STTMKCIALG AAEFLQKPLS 120 EEKLRNIWQH VVHKAFNAGE HSLSKMLNPT KETIPPVLQL PVEKDESKVQ TSLVEIEDLT 180 RRHELHHDLS TASDKFPAPS TPQLKQSGRL LGESECQEQP NCPVEKDPMD HDGDAKSVEN 240 SCNISIENIT AKVDSSSMLV NDSIKEVGST SGSKSPNHLR PEQKSKDSII NSKVEAGNPK 300 KASTSNQNSY VTRASRKKMK VDWTQDLHKR FVKAVEQLGV DQAIPSRILE LMKVEGLTRH 360 NVASHLQKYR LNRRHILPKE EDRRWHHPKD NRHSTPRSNY QQHKPIMAYP SYPPSSHPIC 420 HVWGHPISHL PPPTAQTWGH PSFPAWQTPE NWQWKTFHGM HVDAWGCPVM PPSQNPNFTI 480 PQMQNNASAG YQSLLDTTFE DSSRMAMIES NQLAEEVIDK AVKEAVDMPW LPLPLGLKPP 540 STESVLFELQ RQGISIIPPQ NPNTMWQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-129 | ARR-B family protein |