PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401509.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 480aa MW: 54041.6 Da PI: 8.5974

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.5	4e-19	130	221	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf....erspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 +Wt++e+ aLie + e++ +lrrg+l++ +Weev++++++r +++++qC++k e+l+kry+ + + + + + ss++++f++++ XP_026401509.1 130 CWTHEETSALIESYHEKWYSLRRGNLRASHWEEVADAVARRCNlvvpSKTSVQCRHKVEKLRKRYRTEVQKSLMTpaHHRFSSSWVFFKRMD 221 8***********************************55432234589*************99877654433688899*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MVWWWLYGFA IVIPIHPWVA VADPLLSLIS DFSFSLSLHL IIIITPTTTQ FFNNVHFTHH 60 HPPLLFQLHH HPFLSLTTTT NPNPNSSHTM DMDSQNLSPL STPSQQQKQT TSPSSLTKPS 120 SITRRVPPPC WTHEETSALI ESYHEKWYSL RRGNLRASHW EEVADAVARR CNLVVPSKTS 180 VQCRHKVEKL RKRYRTEVQK SLMTPAHHRF SSSWVFFKRM DLMEKGPSST ATGVDEDEQG 240 GGGDEEEEEE EDDEDEQGGG GEEDDDFRPR YNFDQKNHHN TAYNMSIPNS RNLPNLRNFD 300 CSIMPNGRVG SSSSSGGFRF RIPSAEQQQR RSAPNFAYAK PKNYGAKFDE NVMPNFMPNP 360 NFTSPSSSSR FTNGGVGSSS RLRSGSGKSS GGGGGGGSKG KRKMDPVEEM VSAVRSLGEG 420 FMRMEQMKLE MAREVEKMKM DMELKRTEMI LDSQQRIVDA FAKGFSAKKK AKKMSSPPDS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MVWWWLYGFA IVIPIHPWVA VADPLLSLIS DFSFSLSLHL IIIITPTTTQ FFNNVHFTHH  60
HPPLLFQLHH HPFLSLTTTT NPNPNSSHTM DMDSQNLSPL STPSQQQKQT TSPSSLTKPS  120
SITRRVPPPC WTHEETSALI ESYHEKWYSL RRGNLRASHW EEVADAVARR CNLVVPSKTS  180
VQCRHKVEKL RKRYRTEVQK SLMTPAHHRF SSSWVFFKRM DLMEKGPSST ATGVDEDEQG  240
GGGDEEEEEE EDDEDEQGGG GEEDDDFRPR YNFDQKNHHN TAYNMSIPNS RNLPNLRNFD  300
CSIMPNGRVG SSSSSGGFRF RIPSAEQQQR RSAPNFAYAK PKNYGAKFDE NVMPNFMPNP  360
NFTSPSSSSR FTNGGVGSSS RLRSGSGKSS GGGGGGGSKG KRKMDPVEEM VSAVRSLGEG  420
FMRMEQMKLE MAREVEKMKM DMELKRTEMI LDSQQRIVDA FAKGFSAKKK AKKMSSPPDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-40	Trihelix family protein