PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401104.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 648aa MW: 74515.9 Da PI: 7.7568

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.4e-21	57	142	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y++Y+k++GFsv+k++++k+ +g+ + tf+C +eg+++++ ++ r++++ r gCka+l +++ g we++ l leHnHel+p XP_026401104.1 57 CYKNYGKRMGFSVKKKSNRKN-VEGNLRSVTFCCAREGTPKTTARN---PLRPHVSMRSGCKARLSARLNMVGGWEISVLALEHNHELNP 142 7*************99998.7888************9988...999*********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MEGVSVSSAN DVTIAAVFAD KAVTKETRVE SGELHGNAES EPKIGLTFDG IEEMFECYKN 60 YGKRMGFSVK KKSNRKNVEG NLRSVTFCCA REGTPKTTAR NPLRPHVSMR SGCKARLSAR 120 LNMVGGWEIS VLALEHNHEL NPNISRFVQY HRKPKRKDRG GDKISTSSVN EAGGNEKDSG 180 NMIEQLRRLQ LFKGDAQALM TFFSKMVAEN TGFYFDVELN HEDRPKNVFW ADGRSREVYK 240 EFGEVVMFDT TCLANKYDLP FISFVGVNHH GQSLLLGCGL ISNEDAQTFV WIFSKWLQCM 300 SGCAPQGIVT DQDSAMQNAI EIVFPQTKHR WCLWHVMKKL LDKLGKFAEH QAISVALKDA 360 VFDTQSQDDF EQRWNEVVGK YGLEECNWLS ELYNQRHLWV PRFVKNTFWA GMSTAQQNES 420 MKPFFDGCIQ SKTTLKELVE QYESALRKKV VKEMKDDAES FSKLIPTVTS YPIEKQVQGV 480 YTISKFKEFQ VEVIGKMYCD FLQIEEGPMV KRYVIREDVW LEDFNKRMTF TVSFDERDCA 540 VHCSCQMFEF QGILCRHAVN VLIHNDVRLL PDKYILRRWR KDVKRSYSKV KVSYNCLEND 600 IESVRRNELS SNFSKIAEWG TANDEQYSHI KQWLAYLENE LKLGGGST

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MEGVSVSSAN DVTIAAVFAD KAVTKETRVE SGELHGNAES EPKIGLTFDG IEEMFECYKN  60
YGKRMGFSVK KKSNRKNVEG NLRSVTFCCA REGTPKTTAR NPLRPHVSMR SGCKARLSAR  120
LNMVGGWEIS VLALEHNHEL NPNISRFVQY HRKPKRKDRG GDKISTSSVN EAGGNEKDSG  180
NMIEQLRRLQ LFKGDAQALM TFFSKMVAEN TGFYFDVELN HEDRPKNVFW ADGRSREVYK  240
EFGEVVMFDT TCLANKYDLP FISFVGVNHH GQSLLLGCGL ISNEDAQTFV WIFSKWLQCM  300
SGCAPQGIVT DQDSAMQNAI EIVFPQTKHR WCLWHVMKKL LDKLGKFAEH QAISVALKDA  360
VFDTQSQDDF EQRWNEVVGK YGLEECNWLS ELYNQRHLWV PRFVKNTFWA GMSTAQQNES  420
MKPFFDGCIQ SKTTLKELVE QYESALRKKV VKEMKDDAES FSKLIPTVTS YPIEKQVQGV  480
YTISKFKEFQ VEVIGKMYCD FLQIEEGPMV KRYVIREDVW LEDFNKRMTF TVSFDERDCA  540
VHCSCQMFEF QGILCRHAVN VLIHNDVRLL PDKYILRRWR KDVKRSYSKV KVSYNCLEND  600
IESVRRNELS SNFSKIAEWG TANDEQYSHI KQWLAYLENE LKLGGGST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-110	FAR1 family protein