PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026400362.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 391aa MW: 43347.1 Da PI: 6.5154

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026400362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0016	258	280	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C CgksF++ L H +++ XP_026400362.1 258 FNCAFCGKSFNSYQALGGHKSSC 280 78**********99998887766 PP
2	zf-C2H2	13.2	0.00026	304	326	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C+k+F + L H+++H XP_026400362.1 304 YECKICSKMFQTGQALGGHQKSH 326 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEVRDALLHV NSFVSLKELG EEDTKIFELT EVDDCDELHL RNCTCAEDGD LPVCKENPSQ 60 SRTKGPPNSI GYENGIQNYS IHNSGSDIKQ KSSPATSDGQ RNSPSSSSDA QRPSTSDAQR 120 SSPSTSEKSK AVFPQWEETG KRGRKRSSTS TSSIEKQKEP VFGEKELVET LMHLWALSNS 180 YSIDSANSKK DKSTRFPVTK KRKLQDIVCT KDGLKKARIE KETEEDYRCE IMLDTGKKTY 240 SEASNQQITT LSSASETFNC AFCGKSFNSY QALGGHKSSC KSNPLKKQVV KSAVQDSVAT 300 SKIYECKICS KMFQTGQALG GHQKSHKTGE VEPSRSSVSP PPKEINESLH LIQSSTLSVR 360 EEQSEALNKK IMMFDLNENP PEDDDETELK L

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEVRDALLHV NSFVSLKELG EEDTKIFELT EVDDCDELHL RNCTCAEDGD LPVCKENPSQ  60
SRTKGPPNSI GYENGIQNYS IHNSGSDIKQ KSSPATSDGQ RNSPSSSSDA QRPSTSDAQR  120
SSPSTSEKSK AVFPQWEETG KRGRKRSSTS TSSIEKQKEP VFGEKELVET LMHLWALSNS  180
YSIDSANSKK DKSTRFPVTK KRKLQDIVCT KDGLKKARIE KETEEDYRCE IMLDTGKKTY  240
SEASNQQITT LSSASETFNC AFCGKSFNSY QALGGHKSSC KSNPLKKQVV KSAVQDSVAT  300
SKIYECKICS KMFQTGQALG GHQKSHKTGE VEPSRSSVSP PPKEINESLH LIQSSTLSVR  360
EEQSEALNKK IMMFDLNENP PEDDDETELK L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	204	KKDKSTRFPVTKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	2e-17	C2H2 family protein