PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026400199.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 731aa MW: 84161.2 Da PI: 7.5356

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026400199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84	2.5e-26	88	175	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA++vGFsvrk+ +k+k +++i+ rtf+Cs+eg+re++++ + ++r +trtgC a++++k +++++++v ++ +HnHela XP_026400199.1 88 EFYNVYARSVGFSVRKHWASKRKVDKKIIGRTFCCSCEGQREKHTRG--TPTKPRGVTRTGCMARMQIKINDNENYYVVEFLDDHNHELA 175 6****************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MGEQEKFYPF DLNESSYLDE VVRDGAQEKH YSVDSNEIGC PSEVMVTENG YDVVVRTNTE 60 DISVIEEATG DDITMIGKIF KSEDDAYEFY NVYARSVGFS VRKHWASKRK VDKKIIGRTF 120 CCSCEGQREK HTRGTPTKPR GVTRTGCMAR MQIKINDNEN YYVVEFLDDH NHELASSDKV 180 HLLRSQRKML PAQATLINNM ISSGFGATRI FSYMSEEAGG PQNLNFTQED CNNLVQGKRI 240 EWMKAGDAQL LLDYFQAKQK ENKSFFYTIQ PDEEDRIMNI FWCDAKSRLD YSAFGDVVCF 300 DTTFKTNGYD LPFAPIFGVN NHGQTILFGS ALLKDESTRS FLWLFETFLT VMEGKEMKTI 360 FTDHASQIAN TIKQVFPNAH HRLCLWHIFQ NAAKHLSHIF GIHESFLSDF RKCIYDYETE 420 YEFRSSWEQL LEKYELKDDK WLNNLFKLRE KWAQVYGREH FCAGMTTTQR SESINNYFKK 480 YFKKKQILRE FVGQFDKAVA ARREKAKKAD YKSMATRPNL TSVWEVEEKS SKIYTSKIFN 540 EFQMQVKRLI DLEFKLDSDD GTTSIYKVSS YIGKRAPRTI SDLPSEYYLK RWTKDASNSI 600 VIDSQGNSLM VDCDPSLSAR YSELSHLALS IATTGCINEE ASIFVKQALL QVLKETKSLS 660 TAQPNNVGVD REKNLLEISD EDEDLPQGNT TLKDPIRKKT IGESSARHKD PVEVGKRGKK 720 GKKGKMTKNK K

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MGEQEKFYPF DLNESSYLDE VVRDGAQEKH YSVDSNEIGC PSEVMVTENG YDVVVRTNTE  60
DISVIEEATG DDITMIGKIF KSEDDAYEFY NVYARSVGFS VRKHWASKRK VDKKIIGRTF  120
CCSCEGQREK HTRGTPTKPR GVTRTGCMAR MQIKINDNEN YYVVEFLDDH NHELASSDKV  180
HLLRSQRKML PAQATLINNM ISSGFGATRI FSYMSEEAGG PQNLNFTQED CNNLVQGKRI  240
EWMKAGDAQL LLDYFQAKQK ENKSFFYTIQ PDEEDRIMNI FWCDAKSRLD YSAFGDVVCF  300
DTTFKTNGYD LPFAPIFGVN NHGQTILFGS ALLKDESTRS FLWLFETFLT VMEGKEMKTI  360
FTDHASQIAN TIKQVFPNAH HRLCLWHIFQ NAAKHLSHIF GIHESFLSDF RKCIYDYETE  420
YEFRSSWEQL LEKYELKDDK WLNNLFKLRE KWAQVYGREH FCAGMTTTQR SESINNYFKK  480
YFKKKQILRE FVGQFDKAVA ARREKAKKAD YKSMATRPNL TSVWEVEEKS SKIYTSKIFN  540
EFQMQVKRLI DLEFKLDSDD GTTSIYKVSS YIGKRAPRTI SDLPSEYYLK RWTKDASNSI  600
VIDSQGNSLM VDCDPSLSAR YSELSHLALS IATTGCINEE ASIFVKQALL QVLKETKSLS  660
TAQPNNVGVD REKNLLEISD EDEDLPQGNT TLKDPIRKKT IGESSARHKD PVEVGKRGKK  720
GKKGKMTKNK K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein