PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399548.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 348aa    MW: 39403.5 Da    PI: 7.185
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000186486123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_026399548.1 64 YSCNFCRREFRSAQALGGHMNVH 86
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MEETRYWMWT RSKLGETTPQ VLHTRSSHVH FPTTTTEPSW EEQAFAEDSA GLLLGGCVWP  60
PRSYSCNFCR REFRSAQALG GHMNVHRRDR ARLKQSSPTS PHQHHQNNNM NGNIRPHQAI  120
NQELIQHHQN PTSHVENSSH HHPDHQVHRN SLAFSNLDPN SYNPSFVSSS SLPLSPTYRI  180
TQAAIQSSQN DCIKQTLILP PYLTVIGNQA SNHQKGGSLF STPSDSFASR VVIISENLEE  240
EKDLSTQGKE TGLKVKQGAY NESNSSAMKT FEVSNRSWLT GSADDGEVGR DTISRKRRRN  300
DVDDTSYLPF FVKPILDDRR HLLESNELLG LNLNQSCSKE ELDLELRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1295299RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-26C2H2 family protein