PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026399294.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 295aa    MW: 32451.2 Da    PI: 5.8287
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026399294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00024100122123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_026399294.1 100 FSCNYCQRKFYSSQALGGHQNAH 122
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MEEPSVSSSI SPFYGLDSSE KEEYRNQEEE KGIDLNKGFS SDFSIESEIE YHNNQELNLI  60
GNFNVDSSST SSSTGKKEEE EEEGEEESRE LDAEEEPRVF SCNYCQRKFY SSQALGGHQN  120
AHKRERTIAK RDRHLGEAAA AAFNYANMHH HLNNPYNHHQ YQFSSMGSLP LYGSRSLGVQ  180
VHSMIHKSTS PSSSLPSLLP SSSFGHPQHL YGQNHPGWTA SSSFRPSIVD HQPTIGRLPS  240
FVSGSMPRVP RFNNYEGGVG GGFLLQGGGS DGGGRSSSTA SNQGELKSID LALKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.18e-25C2H2 family protein