PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026399281.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 393aa MW: 44519.1 Da PI: 9.8033

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026399281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.1	1.4e-15	73	172	2	72
trihelix 2 WtkqevlaLiearremeerlrrgk.............................lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 Wt +e+l+Li+a++ ++er ++k +++ +W++v +++++ g+ rs++qC++kw+nl ++ykk++e XP_026399281.1 73 WTLHETLVLITAKKMDDERRTTTKssstttantppllvvptnksssssssgcrSAELRWKWVENYCWKNGCMRSQNQCNDKWDNLLRDYKKVREY 167 ************888888877667888999999999999999999999999***************************************9 PP trihelix 68 ekkrt 72 e++ + XP_026399281.1 168 ESRSS 172 99853 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MVNFHTVFIS LSNAKTMSEP QNTTSSSSAL VPVHHYQHHH EPEQETQVIV SQVALPNPSA 60 SSSLIREYRK GNWTLHETLV LITAKKMDDE RRTTTKSSST TTANTPPLLV VPTNKSSSSS 120 SSGCRSAELR WKWVENYCWK NGCMRSQNQC NDKWDNLLRD YKKVREYESR SSFSTTTTTT 180 TSDNLIIPSY WQMEKHERKE RNLPTNLFFE AFQSLNEVVQ RRHLQRQSHP KPSQPSNIIV 240 STTCPPTISV AIPPPQALPH QHRFLPPPPL QPPQSLLPPL VETITTPTTD STETEGSSER 300 LETADRKRKS KVRKLGASIT RSASVLTKTL TDCEEMKEKR HQHKMQLEER KLQIEETKIE 360 VNKQGFNGLI TAINNLSGAI QSLVSSNRQN NAS

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MVNFHTVFIS LSNAKTMSEP QNTTSSSSAL VPVHHYQHHH EPEQETQVIV SQVALPNPSA  60
SSSLIREYRK GNWTLHETLV LITAKKMDDE RRTTTKSSST TTANTPPLLV VPTNKSSSSS  120
SSGCRSAELR WKWVENYCWK NGCMRSQNQC NDKWDNLLRD YKKVREYESR SSFSTTTTTT  180
TSDNLIIPSY WQMEKHERKE RNLPTNLFFE AFQSLNEVVQ RRHLQRQSHP KPSQPSNIIV  240
STTCPPTISV AIPPPQALPH QHRFLPPPPL QPPQSLLPPL VETITTPTTD STETEGSSER  300
LETADRKRKS KVRKLGASIT RSASVLTKTL TDCEEMKEKR HQHKMQLEER KLQIEETKIE  360
VNKQGFNGLI TAINNLSGAI QSLVSSNRQN NAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	4e-46	Trihelix family protein