PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026399271.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 225aa MW: 26590.2 Da PI: 9.6661 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 32.3 | 3.3e-10 | 11 | 56 | 46 | 90 |
FAR1 46 kktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +++ +++r+++ rt+Cka+++v + + w+++++ ++HnH ++ XP_026399271.1 11 EDNYRKQRNTSIMRTDCKAMIRVAIDGrFQIWYINEFIEDHNHVMV 56 3346899999**************99989**************886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MHNKDYDLDE EDNYRKQRNT SIMRTDCKAM IRVAIDGRFQ IWYINEFIED HNHVMVSPKK 60 IMLMRSNKHM PLESKSLAEA FNKSKIHVGK VVSLFGQRES TGFDTRDVYN HLRNVRKSLL 120 DVGDAAALVN YFRRRTLENP SFYYAFQVDE EGRATNVWVD ARSWIAYIRF GDAVTFDTTY 180 KTNKYSMLFA PFTGTNHHRQ SITFGFAWLG NERRRHIYLV VYDMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-40 | FAR1 family protein |