PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026399263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 200aa MW: 23387.8 Da PI: 10.7677 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.8 | 2e-19 | 19 | 102 | 7 | 90 |
FAR1 7 AkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++GFs+r ++++ks+ + e++ rtf+Cs++g r ++ k e+++r++a rt Ck +++kk+ +++w+v+++++e nH+l+ XP_026399263.1 19 QGKTGFSIRWHSTNKSRVEpFEVIVRTFCCSRQGLRGRRAKPVEERKRQQADVRTYCKLVMMIKKR-NDRWVVSRVVEERNHKLV 102 5689********9999654268********************9***********************.9***************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEDIGNVNLL DGEKENGFQG KTGFSIRWHS TNKSRVEPFE VIVRTFCCSR QGLRGRRAKP 60 VEERKRQQAD VRTYCKLVMM IKKRNDRWVV SRVVEERNHK LVFPNKKHNL RSLRIISSVQ 120 KQQIVNYRIA GVKTDQLISY LAVENGGVKN IGFLPKNARN YLSTRRQLEL KHGDAQAVLD 180 YFERQQMQNP SFFYSIQVDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-27 | FAR1 family protein |