PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398732.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 785aa MW: 90149.1 Da PI: 8.0383

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.6	1.1e-14	99	170	1	77
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwe 77 ++Yn YA++vGFsvr+++++++ r+++i ++ +vC++eg+ ++ ++ +++rae r gCka++++k+ + +k+e XP_026398732.1 99 EYYNIYARKVGFSVRIQRTNRN-RTEKIRRQLLVCNCEGSYRKVRTP----KKKRAERRFGCKAMFEIKLCDGDKYE 170 69*****************9.6666*********9997766....999***************987775 PP

Sequence ? help Back to Top
Protein Sequence Length: 785 aa Download sequence
MILKEFYEAN VDIAPRGDSI IEVSKSCNVS EDEGDIDGNY SNCSKDSLGF ESDCEMVNEY 60 CEKVENHETR EIFSDGIETR TKEDPKIGMI FDTIDEAYEY YNIYARKVGF SVRIQRTNRN 120 RTEKIRRQLL VCNCEGSYRK VRTPKKKRAE RRFGCKAMFE IKLCDGDKYE KFSYMREESG 180 CARNLNFTRI DSNNFIHRIK RLEFFKKGDA QCLLDYFKKK KQENKHFFYC FRTNEDGETR 240 GVFFCDAQSR RDYALFGDAV CFDTTFRTKN YNMLCAPIVG INNHGQTTLF GCGLIDGEST 300 DAVVWLFNTF MEAMEGKRPV SIFSDQAPGI LKAVEEVFPD SHHGLCLWHI SQNAAKHLGK 360 TFSEYKSFAS DFKSCIYDPE TIDEFEKNWK KMLEDYKLTN NEWLQGIYDL REKWAQVYSH 420 SYFCAGITTT QRSESINKFL KSYFSREAAK FYTRKMFSIF QEELKLIVGL LLEMEKEDGG 480 IRIYKAKDID DMRRIRTLTY NSIENSVSCS CRKFEFSGIL CAHALKVFHD LQYKNLPPQY 540 YLKRWSKKAT NEVVFDASGD LIPNDNDPSA TQCYSELSHI SQRIVSKCCS QSKELFDLTK 600 LSLLRVEQQM EAHIRSLKEQ ESNVPHSTSN APTPVPNVIE EEVLRDPQKK ISKGQSRKRI 660 KGPFDTGVPK NSVKKGRTVD EVTMNQLVYN SEGLEASQGV VDHQRLLLHS GSLLTQQAAR 720 SQNSTSIGTS ISTTKRKPRI CKTCDKGGHD TRNCPRKKEI GKLGIGIVVG GQVLDDNGHL 780 DVNNG

Sequence ? help Back to Top

Protein Sequence Length: 785 aa Download sequence

MILKEFYEAN VDIAPRGDSI IEVSKSCNVS EDEGDIDGNY SNCSKDSLGF ESDCEMVNEY  60
CEKVENHETR EIFSDGIETR TKEDPKIGMI FDTIDEAYEY YNIYARKVGF SVRIQRTNRN  120
RTEKIRRQLL VCNCEGSYRK VRTPKKKRAE RRFGCKAMFE IKLCDGDKYE KFSYMREESG  180
CARNLNFTRI DSNNFIHRIK RLEFFKKGDA QCLLDYFKKK KQENKHFFYC FRTNEDGETR  240
GVFFCDAQSR RDYALFGDAV CFDTTFRTKN YNMLCAPIVG INNHGQTTLF GCGLIDGEST  300
DAVVWLFNTF MEAMEGKRPV SIFSDQAPGI LKAVEEVFPD SHHGLCLWHI SQNAAKHLGK  360
TFSEYKSFAS DFKSCIYDPE TIDEFEKNWK KMLEDYKLTN NEWLQGIYDL REKWAQVYSH  420
SYFCAGITTT QRSESINKFL KSYFSREAAK FYTRKMFSIF QEELKLIVGL LLEMEKEDGG  480
IRIYKAKDID DMRRIRTLTY NSIENSVSCS CRKFEFSGIL CAHALKVFHD LQYKNLPPQY  540
YLKRWSKKAT NEVVFDASGD LIPNDNDPSA TQCYSELSHI SQRIVSKCCS QSKELFDLTK  600
LSLLRVEQQM EAHIRSLKEQ ESNVPHSTSN APTPVPNVIE EEVLRDPQKK ISKGQSRKRI  660
KGPFDTGVPK NSVKKGRTVD EVTMNQLVYN SEGLEASQGV VDHQRLLLHS GSLLTQQAAR  720
SQNSTSIGTS ISTTKRKPRI CKTCDKGGHD TRNCPRKKEI GKLGIGIVVG GQVLDDNGHL  780
DVNNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-93	FAR1 family protein