PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398726.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 319aa MW: 35777 Da PI: 8.4184

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398726.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0011	200	221	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C CgksFs+ L H +++ XP_026398726.1 200 SCAFCGKSFSSYQALGGHKSSC 221 7**********99998888776 PP
2	zf-C2H2	15.2	6e-05	247	269	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k+Fs+ L H+r+H XP_026398726.1 247 HQCDWCSKTFSTGQALGGHQRLH 269 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MEDQKMMAPR KFMFLQSRIN AGFKNEEDSH LQENSKSSSK SDSDFNGNIS LTFDAHWNTP 60 TCGVSDSHKF HLLQWEKTAE GGRKSLSSSS SGLLYSSLSS NDGKQVELLS DEKEAVDTLL 120 MLANCYSEDR IVSSKNPPEK DRIAEFPDLK KKRKTNIGCT KDRLKNARIE KETENCRDEI 180 ILDTEALHKQ MKSSGSGRLS CAFCGKSFSS YQALGGHKSS CRSNPLKKAL QGSMRDTIKE 240 LTSSDIHQCD WCSKTFSTGQ ALGGHQRLHR TGQAEPRISR PLVSGKEISK EKSRIHYLTS 300 SVQEAQDQHH CHYFETVIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	7e-17	C2H2 family protein