PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398722.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 317aa MW: 35529.5 Da PI: 9.4282

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	194	216	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C Cgk+F++ L+ H +++ XP_026398722.1 194 FNCAFCGKPFNSYQALVGHKSSC 216 78*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MTKIRINVDN NYKFLGFSMH ENGIQNYSIH NSGSDIKPKS SPSTSDGKRN SPSTSDAQRN 60 SPSTYDGKRN SPSTSDAQRH SPSSYDAQRS STVFPKWVKT AKRGRKSLST STSSIEEQKE 120 PVFANSKKDK NTRLPVNKKR KLQDIVSTED GLKKERIEKE TEADYRGEIM FDTLKKTYLE 180 ASHQQITTLP SETFNCAFCG KPFNSYQALV GHKSSCRSNP LKKEVVKSAV QDSNATSKIH 240 RCKICSKESL TGQALGGHQK SHKTGEVEPL NESLHVFQSS TSSVREEQAE VPNKKIMMFD 300 LNENPPEEDE DETELKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	141	KRGRKSLSTSTSSIEEQKEPVFANSKKDKNTRLPVNKKRK
2	127	142	KKDKNTRLPVNKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	1e-12	C2H2 family protein