PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398365.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 649aa MW: 76130.7 Da PI: 5.1782

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398365.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.7	8.9e-19	73	154	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Y++YAk+ GF vrk+++ ++ ++g i++ +vC+++ ++ +++k+ ++r+++ ++Cka ++ ++++++kwe+++l+l+HnH+ XP_026398365.1 73 YKAYAKREGFAVRKRTNWRN-EEGIIKSVMYVCNRSVNPVNKTKN---IAKHRKSNCCDCKAYVTARLDDEDKWEISQLKLDHNHT 154 9****************9.8888*********9999888...8999999****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MVHMIHMFII HRTVYIVNLY QVYDTSNLIL SVDGGVSLDD TEKEAGEKTQ NTDEDEWYIG 60 KKFETHDDLF RAYKAYAKRE GFAVRKRTNW RNEEGIIKSV MYVCNRSVNP VNKTKNIAKH 120 RKSNCCDCKA YVTARLDDED KWEISQLKLD HNHTYDPSLS RHYRQHRKVE PHVLRTIDLN 180 DQSGIPMEKT FRSVVNQYGG YDKVDCSEKD CRNALAEIRR LRLGEGDATA LMKYFSKKVK 240 ENSGFYFEVD YDDENQLRNV FWADGWSREA YKEFGEVISF DATYMTNDYD MPFTPFVVVN 300 HHGQSIFLGC GLLCNETTET FVWLFKKWLK CMSGCAPRAI IDDQCQAMKN AVEIVFPEAR 360 HRWCLWHIMK KIPEKFGSYK QREKIVFALQ EAVYDSQTPA EFEESWKKMI DKYNLQQNTW 420 LRDLYPEKER WVPCFLKDTF WAGKASTQHS ESINAIFKGY AYSKTKLKQF VELCEQALRA 480 KVKKEFKEDA ESCTKAIPLI YGYPFEKQLR DMYTLVKFQE FQKEIRGKIA CEVVDFDEVT 540 EVHKYVIRED IWLDNDFCKK VKFNVTFRKI ETDDDSSEEE DGDIAVEVVD DGEGMVDLET 600 NNESETDDNE TNGSETERSG TDDSEKEECV FDKRTDETEA TEAKKIKKN

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MVHMIHMFII HRTVYIVNLY QVYDTSNLIL SVDGGVSLDD TEKEAGEKTQ NTDEDEWYIG  60
KKFETHDDLF RAYKAYAKRE GFAVRKRTNW RNEEGIIKSV MYVCNRSVNP VNKTKNIAKH  120
RKSNCCDCKA YVTARLDDED KWEISQLKLD HNHTYDPSLS RHYRQHRKVE PHVLRTIDLN  180
DQSGIPMEKT FRSVVNQYGG YDKVDCSEKD CRNALAEIRR LRLGEGDATA LMKYFSKKVK  240
ENSGFYFEVD YDDENQLRNV FWADGWSREA YKEFGEVISF DATYMTNDYD MPFTPFVVVN  300
HHGQSIFLGC GLLCNETTET FVWLFKKWLK CMSGCAPRAI IDDQCQAMKN AVEIVFPEAR  360
HRWCLWHIMK KIPEKFGSYK QREKIVFALQ EAVYDSQTPA EFEESWKKMI DKYNLQQNTW  420
LRDLYPEKER WVPCFLKDTF WAGKASTQHS ESINAIFKGY AYSKTKLKQF VELCEQALRA  480
KVKKEFKEDA ESCTKAIPLI YGYPFEKQLR DMYTLVKFQE FQKEIRGKIA CEVVDFDEVT  540
EVHKYVIRED IWLDNDFCKK VKFNVTFRKI ETDDDSSEEE DGDIAVEVVD DGEGMVDLET  600
NNESETDDNE TNGSETERSG TDDSEKEECV FDKRTDETEA TEAKKIKKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-96	FAR1 family protein