PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398280.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 263aa    MW: 30438.2 Da    PI: 8.3055
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.51.6e-2683172190
            FAR1   1 kfYneYAkevGFsvrkskskkskrn.geitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fYn++A ++GFs+r ++++ks+ +  e++ rtf+Cs++g r++++k  e+++r+++  rt+Cka +++kk+ +++w+v+ +++eHnH+l+
  XP_026398280.1  83 DFYNRFAGKAGFSIRWHSTNKSRVDpFEVIGRTFCCSCQGLRNRRSKPVEQRKRHQEDVRTDCKAVMMIKKR-NDRWVVSGVVEEHNHKLV 172
                     6********************9766258********************************************.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MKRDDADTGD YGRLYSYEDE IQISSEETFT DMKDIENINS LDGEELNGEV IAANSAKEPS  60
EEELNAVRPY VGKKFESQDE AYDFYNRFAG KAGFSIRWHS TNKSRVDPFE VIGRTFCCSC  120
QGLRNRRSKP VEQRKRHQED VRTDCKAVMM IKKRNDRWVV SGVVEEHNHK LVSTSKRHNL  180
RSLRKISSSH KQQIVNFRLA GVKTNQLINY LEVENGGVKN IGFLPKDAII YLSTKRKLEL  240
KHGDAQAVLD YFERQQMENP SFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-32FAR1 family protein