PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397307.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 430aa MW: 48219.8 Da PI: 8.0639

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.3	1.4e-40	192	268	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v g+eqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk++ XP_026397307.1 192 RCQVEGCHVALIHAKDYHRRHKVCEMHSKAPKVVVLGIEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSS 268 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MENEEQQHQH QNHQNNHNNM NGRGQNGSSN NYSWDFWELG TNSWSNNNSY TNTSNEDKYN 60 NNTSRTTATM FSNNPTSSHS QTQHLNLHPN LHYHNHQQLH HSLYTGGGSN LHPDPHLTCL 120 KLGKRQYFED VNNGGPTVMG DRHVSGFPMG LMKRGRSYDG VDVAVLGGGP SSSSLSSIGV 180 GLIGSSTVVV PRCQVEGCHV ALIHAKDYHR RHKVCEMHSK APKVVVLGIE QRFCQQCSRF 240 HVISEFDDSK RSCRRRLAGH NERRRKSSSS DATSSRNSSS QESRSTDGRI SYISPTNGRV 300 HSLLSSKSNS WVSPSDLSTR SSAALRELID ENRAAVLARQ LLLDQNWHQQ GMDHTNHNSQ 360 VEILSTVPLQ NQFPGSSNWN RFQQSDAHVT LDLMQTPSPP FGFLSGRSKT KEEEEECCEI 420 WKSLEGTHVV

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MENEEQQHQH QNHQNNHNNM NGRGQNGSSN NYSWDFWELG TNSWSNNNSY TNTSNEDKYN  60
NNTSRTTATM FSNNPTSSHS QTQHLNLHPN LHYHNHQQLH HSLYTGGGSN LHPDPHLTCL  120
KLGKRQYFED VNNGGPTVMG DRHVSGFPMG LMKRGRSYDG VDVAVLGGGP SSSSLSSIGV  180
GLIGSSTVVV PRCQVEGCHV ALIHAKDYHR RHKVCEMHSK APKVVVLGIE QRFCQQCSRF  240
HVISEFDDSK RSCRRRLAGH NERRRKSSSS DATSSRNSSS QESRSTDGRI SYISPTNGRV  300
HSLLSSKSNS WVSPSDLSTR SSAALRELID ENRAAVLARQ LLLDQNWHQQ GMDHTNHNSQ  360
VEILSTVPLQ NQFPGSSNWN RFQQSDAHVT LDLMQTPSPP FGFLSGRSKT KEEEEECCEI  420
WKSLEGTHVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	3e-32	SBP family protein