PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397296.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 961aa MW: 109835 Da PI: 7.9649

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.1	4.5e-21	183	268	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA++vGFsvr+++++++ r+++i ++ +vC++eg+ ++ ++ +++rae r gCka++++k+ + +k+ev+ + +H+H+l+p XP_026397296.1 183 EYYNRYARKVGFSVRIQRTNRN-RTEKIRRQLLVCNCEGSYRKVRTP----KKKRAERRFGCKAMFEIKLCDGDKYEVIGFCANHTHDLVP 268 69*****************9.6666*********9997766....999********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 961 aa Download sequence
MVFASAALSH VSGEVNENPF EILRLWIQSL SISFVPSKGA AGEVTQDHTG CFLGCETVTF 60 DATSSLLAES IACNLGVSLA KSNNMILKEF YEANVDIAPR GDSIIEVSKS CSVSEDEGDI 120 DGNYSNCSKD SLGFESDCEM VNEYCEKVEN HETREIFSDG IETRMKEDPK IGMIFDTIDE 180 AYEYYNRYAR KVGFSVRIQR TNRNRTEKIR RQLLVCNCEG SYRKVRTPKK KRAERRFGCK 240 AMFEIKLCDG DKYEVIGFCA NHTHDLVPAW GSHYLKSQRK IEVPQQGIIS KMYDSGIKPA 300 EIFSYMREES GCARNLNFTR IDSNNFIQRI KRLEFFKKGD AQCLIDYFKK KKQENKHFFY 360 CFRTNEDGET RGVFFCDAQS RRDYALFGDA VCFDTTFRTN NYNMLCAPIV GINNHGKTTL 420 FGCGLIDGES TDAVVWLFNT FMEAMEGKRP VSIFSDQAPG ILKAVEEVFP YSHHGLCLWH 480 ISQNAAKHLG KTFSEYKSFA SDFKSCIYDP ETIDEFEKNW KKMLEDYKLT NNEWLQGIYD 540 LREKWAQVYS HSYFCAGITT TQRSESINKF LKSYFCNGKI LLRQFFHKYS KAMTDRREKV 600 LEEEFKTQQT SPNVFFYWNV AREAAKFYTR KMFSIFQEEL KLIVGLLLEM EKEDGGIRIY 660 KAKDIDDMRR IRTLTYNSIE NSVSCSCRKF EFSGILCAHA LKVFHDLQYK NLPPQYYLKR 720 WSKKATNEVV FDASGDLIPN DNDTSATQCY SELSHISQRI VSKCCSQSKE LFDLTKLSLL 780 RVEQQMEAHI RSLKEQESNV PHSTSNAPTP VPNVIEEEVL RDPQKKISRG QSRKQIKGPF 840 DTGVPKNSVK KGRTVDEVTM NQLVYNSERL EASQGVVDHQ RLLLHSGSLL TQQAARSQNS 900 TSIGTSISTT KRKPRICKPC DKGGHDTRNC PRKKEIGKLG IGIVVGGQVL DDNGHLDVNN 960 G

Sequence ? help Back to Top

Protein Sequence Length: 961 aa Download sequence

MVFASAALSH VSGEVNENPF EILRLWIQSL SISFVPSKGA AGEVTQDHTG CFLGCETVTF  60
DATSSLLAES IACNLGVSLA KSNNMILKEF YEANVDIAPR GDSIIEVSKS CSVSEDEGDI  120
DGNYSNCSKD SLGFESDCEM VNEYCEKVEN HETREIFSDG IETRMKEDPK IGMIFDTIDE  180
AYEYYNRYAR KVGFSVRIQR TNRNRTEKIR RQLLVCNCEG SYRKVRTPKK KRAERRFGCK  240
AMFEIKLCDG DKYEVIGFCA NHTHDLVPAW GSHYLKSQRK IEVPQQGIIS KMYDSGIKPA  300
EIFSYMREES GCARNLNFTR IDSNNFIQRI KRLEFFKKGD AQCLIDYFKK KKQENKHFFY  360
CFRTNEDGET RGVFFCDAQS RRDYALFGDA VCFDTTFRTN NYNMLCAPIV GINNHGKTTL  420
FGCGLIDGES TDAVVWLFNT FMEAMEGKRP VSIFSDQAPG ILKAVEEVFP YSHHGLCLWH  480
ISQNAAKHLG KTFSEYKSFA SDFKSCIYDP ETIDEFEKNW KKMLEDYKLT NNEWLQGIYD  540
LREKWAQVYS HSYFCAGITT TQRSESINKF LKSYFCNGKI LLRQFFHKYS KAMTDRREKV  600
LEEEFKTQQT SPNVFFYWNV AREAAKFYTR KMFSIFQEEL KLIVGLLLEM EKEDGGIRIY  660
KAKDIDDMRR IRTLTYNSIE NSVSCSCRKF EFSGILCAHA LKVFHDLQYK NLPPQYYLKR  720
WSKKATNEVV FDASGDLIPN DNDTSATQCY SELSHISQRI VSKCCSQSKE LFDLTKLSLL  780
RVEQQMEAHI RSLKEQESNV PHSTSNAPTP VPNVIEEEVL RDPQKKISRG QSRKQIKGPF  840
DTGVPKNSVK KGRTVDEVTM NQLVYNSERL EASQGVVDHQ RLLLHSGSLL TQQAARSQNS  900
TSIGTSISTT KRKPRICKPC DKGGHDTRNC PRKKEIGKLG IGIVVGGQVL DDNGHLDVNN  960
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-125	FAR1 family protein