PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396590.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 774aa MW: 89534.7 Da PI: 8.9901

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.7	2.9e-21	37	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 fY+eY+++ GFs+rk++s+ s + g i + fvC +eg ++++ k+++++++ rt+Cka++++ ++ ++ w+++ + XP_026396590.1 37 FYKEYGRSKGFSTRKRSSYASAHRGGISRVIFVCGCEGVYGKDSNYddsnifdddeveheIGKRKKNTSTMRTDCKAMMRIDLDVkRKIWYINAF 131 9***********************************99998888899***999877888899999********9989**** PP FAR1 82 eleHnHela 90 + eHnH ++ XP_026396590.1 132 VDEHNHVMV 140 ****886 PP

Sequence ? help Back to Top
Protein Sequence Length: 774 aa Download sequence
MGTTIENNEI DCNNTSSKDL KPAVGLEFSS IETADLFYKE YGRSKGFSTR KRSSYASAHR 60 GGISRVIFVC GCEGVYGKDS NYDDSNIFDD DEVEHEIGKR KKNTSTMRTD CKAMMRIDLD 120 VKRKIWYINA FVDEHNHVMV SPKKRVLMRS NKYMPSEAKS LAEAFNKNRL PVGKVASLFG 180 HSENTTFTPR DVYNHLRTVR KSLLDVGDAE ALHDYFRKRI IENPSFYYAI QVDEIGRAAK 240 KFWVDARSRM AYSRFGDVVT FDTTYRTNKY SMPFAPFTGT NHHHQSITFG FALIGDETKE 300 TFTWLFKTWL EAMGGTPPIS ILTDQDQAMT IAIATVLPNT RHRFCLWHIK KKFGEKLSHV 360 FFKKSKFKRT VKAVTRFTYT IEDFENQWNS MLIEFNLTEH EWLKDLYDIR EKWIPTYNRS 420 TFFAGMNTTQ RSESINSFFD HYVNSRTSLR KFVESCDQSL ERMYVREREE DYKSIHMKLI 480 FASQDLLVRH ASKVFTRVIF NKVHAEFNAS LKYRSTIIEV NGYEHSYKVF WKVDNDIVEE 540 FPLKINELTK SGTCGCQNFE FKGIPCRHFH HILVSRLYET EIPPHFIMER WTKNANKCAV 600 LGSDRLEIKD DKVGIEAMRI SHYCRRSSEL AYMFLGKSKK AYEMAIDFLN QAFEKARDID 660 NVELEKEHGE DITIDQACTT AVDVPDDVSN VTTAAKMILG DPRISQMKGR NPEKGKTNVA 720 EDSRLQSGIE LSQTRKRPRT CKYCKFEGHD SRTCKQKKAD QLVVVSANSG SGTA

Sequence ? help Back to Top

Protein Sequence Length: 774 aa Download sequence

MGTTIENNEI DCNNTSSKDL KPAVGLEFSS IETADLFYKE YGRSKGFSTR KRSSYASAHR  60
GGISRVIFVC GCEGVYGKDS NYDDSNIFDD DEVEHEIGKR KKNTSTMRTD CKAMMRIDLD  120
VKRKIWYINA FVDEHNHVMV SPKKRVLMRS NKYMPSEAKS LAEAFNKNRL PVGKVASLFG  180
HSENTTFTPR DVYNHLRTVR KSLLDVGDAE ALHDYFRKRI IENPSFYYAI QVDEIGRAAK  240
KFWVDARSRM AYSRFGDVVT FDTTYRTNKY SMPFAPFTGT NHHHQSITFG FALIGDETKE  300
TFTWLFKTWL EAMGGTPPIS ILTDQDQAMT IAIATVLPNT RHRFCLWHIK KKFGEKLSHV  360
FFKKSKFKRT VKAVTRFTYT IEDFENQWNS MLIEFNLTEH EWLKDLYDIR EKWIPTYNRS  420
TFFAGMNTTQ RSESINSFFD HYVNSRTSLR KFVESCDQSL ERMYVREREE DYKSIHMKLI  480
FASQDLLVRH ASKVFTRVIF NKVHAEFNAS LKYRSTIIEV NGYEHSYKVF WKVDNDIVEE  540
FPLKINELTK SGTCGCQNFE FKGIPCRHFH HILVSRLYET EIPPHFIMER WTKNANKCAV  600
LGSDRLEIKD DKVGIEAMRI SHYCRRSSEL AYMFLGKSKK AYEMAIDFLN QAFEKARDID  660
NVELEKEHGE DITIDQACTT AVDVPDDVSN VTTAAKMILG DPRISQMKGR NPEKGKTNVA  720
EDSRLQSGIE LSQTRKRPRT CKYCKFEGHD SRTCKQKKAD QLVVVSANSG SGTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-131	FAR1 family protein