PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396537.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 545aa MW: 63471.8 Da PI: 7.198

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396537.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	88.5	9.2e-28	61	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA++vGFsvrk++ +k+k ++e++ r f+Cs+eg+re++ + + ++ra trtgC a+++++ ++d+++ + ++++eHnHel+ XP_026396537.1 61 EFYNAYARTVGFSVRKQSASKRKADKEVMGRIFCCSREGEREKHPRG--TPTKPRALTRTGCMARMQIRINDDETYSIVSFVTEHNHELF 148 6****************************************9998..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MEEQEKSYSI DLNETADPGE SISEENYVQT ITEVSVVTGK PMENDENIMG RTFKSDDDAY 60 EFYNAYARTV GFSVRKQSAS KRKADKEVMG RIFCCSREGE REKHPRGTPT KPRALTRTGC 120 MARMQIRIND DETYSIVSFV TEHNHELFSQ DKMHLLRSQR KIQPAQATLI NNMVSAGFGA 180 TRIFSYMSEE AGGPQNLNFT QEDCNNLVQA KRIGYLKEGD AKVLLAYFKR KQKENKSFFY 240 TIQVGDDGCI MNYFWCDAKS RLDYSIFGNV VCFDTTFKTN GYDMLFAPIV GVNNHGQTIL 300 FGYALLKNET TDSFVWLFET FLDVMEGKEM KTIFTDQASQ MATTIKQVFP NAHHRLCLWH 360 IFQNATKHLS NIFGTHKSFA SDFRKCIYDY ETEDEFLLGW EQLLETYDLK DNKWLNNLFK 420 LREKWSQVYG REHFCAGMTT TQRSESINNY FKKYFKKKQT LSEFVVQSDK AVDARREKAR 480 KADHKSVSTQ PDLTSVWEVE KKAAEIYTRK IFNEFHSELL RLIDLYLNSI LMTEQQTYIK 540 YHHIL

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MEEQEKSYSI DLNETADPGE SISEENYVQT ITEVSVVTGK PMENDENIMG RTFKSDDDAY  60
EFYNAYARTV GFSVRKQSAS KRKADKEVMG RIFCCSREGE REKHPRGTPT KPRALTRTGC  120
MARMQIRIND DETYSIVSFV TEHNHELFSQ DKMHLLRSQR KIQPAQATLI NNMVSAGFGA  180
TRIFSYMSEE AGGPQNLNFT QEDCNNLVQA KRIGYLKEGD AKVLLAYFKR KQKENKSFFY  240
TIQVGDDGCI MNYFWCDAKS RLDYSIFGNV VCFDTTFKTN GYDMLFAPIV GVNNHGQTIL  300
FGYALLKNET TDSFVWLFET FLDVMEGKEM KTIFTDQASQ MATTIKQVFP NAHHRLCLWH  360
IFQNATKHLS NIFGTHKSFA SDFRKCIYDY ETEDEFLLGW EQLLETYDLK DNKWLNNLFK  420
LREKWSQVYG REHFCAGMTT TQRSESINNY FKKYFKKKQT LSEFVVQSDK AVDARREKAR  480
KADHKSVSTQ PDLTSVWEVE KKAAEIYTRK IFNEFHSELL RLIDLYLNSI LMTEQQTYIK  540
YHHIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-122	FAR1 family protein