PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396325.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 874aa MW: 100979 Da PI: 7.3492

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.7	2.5e-20	91	176	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 kfYn+YA ++GFsvrks+++ ++g+ +r +vCs +g+ree+k++ ++ +++raetr gC a++k++++ d k++v+k+ H+H XP_026396325.1 91 KFYNAYAFMMGFSVRKSRTHLF-QDGKLRDRLYVCSAQGTREEDKRD-DTVQNHRAETRFGCLAEMKINRTPDCKYRVSKFFPYHTHV 176 6**************99998.7888*************999.9999*********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 874 aa Download sequence
MEPDDLENAC PADKFIEGSQ TNRRLDFDQG IYLNTSLTDE LIEEPENTIN VDESIEEPTN 60 TRNVDLMHFR IRKEEIPVVG MEFGTEDDAF KFYNAYAFMM GFSVRKSRTH LFQDGKLRDR 120 LYVCSAQGTR EEDKRDDTVQ NHRAETRFGC LAEMKINRTP DCKYRVSKFF PYHTHVTTTP 180 SKSHLFRSHR KLNIANAAQA DMADSSGIAP KEAFEFMSRQ AGGRENLGFI PIDHKNYLRT 240 KRTRKIKYGE TGGVLEYLQK MQVNDPNFYS AIQVDEDDLI TNIFWADARM MLDYDLFGDV 300 VCFDTTFRKN KEGRPFAMFV GVNHHKQSII FGAALLYDES AETFIWLFDT FSKAMSGKKP 360 KSIFTDQDAA MAKALASQWP ESCHRLCIWH IYQNAAKHLS HVFHKFTNFA TDFTNCVYDY 420 EDEEEFTNGW FKMLEKYNLN GNDWLRRLYD LKEKWALVYG RDTFCAEITT TQRSESLNSL 480 VKRYVSYKYD LLRFFENFER LVDDRRYEEK RMDFRASQST PTLSFPVKIL KHAASVYTPA 540 VFKLFQIQLC RAHDCSFSCF NDGESETLSK YKVIPHGKKY HRTVIYDSKN NNVSCSCRKF 600 EFAGYLCSHA LKILCVKDIK SIPDQYILKR WTKDIKCVST KIGSNLHEKR ESRENVVRRY 660 RELCRSLFQL ATRAAESEEV YEIAKLGLDT TLKEVDASLR GLTIQEDPIN KDITSETSDD 720 PKLVLTAIHN SYQAVKGIKT KEKATGTTYE PNSFTGTMAI YSSQMLPMPS STLIPQRSSH 780 ELPMHLPMSL PSHDFYMGTM PTLTSVPIYS NPMLQTTLPS NNVPQWYTGG SGGYNTISNY 840 QQHSNGMVNF LQVQLMNLFV FPVPLKHLFI GPCY

Sequence ? help Back to Top

Protein Sequence Length: 874 aa Download sequence

MEPDDLENAC PADKFIEGSQ TNRRLDFDQG IYLNTSLTDE LIEEPENTIN VDESIEEPTN  60
TRNVDLMHFR IRKEEIPVVG MEFGTEDDAF KFYNAYAFMM GFSVRKSRTH LFQDGKLRDR  120
LYVCSAQGTR EEDKRDDTVQ NHRAETRFGC LAEMKINRTP DCKYRVSKFF PYHTHVTTTP  180
SKSHLFRSHR KLNIANAAQA DMADSSGIAP KEAFEFMSRQ AGGRENLGFI PIDHKNYLRT  240
KRTRKIKYGE TGGVLEYLQK MQVNDPNFYS AIQVDEDDLI TNIFWADARM MLDYDLFGDV  300
VCFDTTFRKN KEGRPFAMFV GVNHHKQSII FGAALLYDES AETFIWLFDT FSKAMSGKKP  360
KSIFTDQDAA MAKALASQWP ESCHRLCIWH IYQNAAKHLS HVFHKFTNFA TDFTNCVYDY  420
EDEEEFTNGW FKMLEKYNLN GNDWLRRLYD LKEKWALVYG RDTFCAEITT TQRSESLNSL  480
VKRYVSYKYD LLRFFENFER LVDDRRYEEK RMDFRASQST PTLSFPVKIL KHAASVYTPA  540
VFKLFQIQLC RAHDCSFSCF NDGESETLSK YKVIPHGKKY HRTVIYDSKN NNVSCSCRKF  600
EFAGYLCSHA LKILCVKDIK SIPDQYILKR WTKDIKCVST KIGSNLHEKR ESRENVVRRY  660
RELCRSLFQL ATRAAESEEV YEIAKLGLDT TLKEVDASLR GLTIQEDPIN KDITSETSDD  720
PKLVLTAIHN SYQAVKGIKT KEKATGTTYE PNSFTGTMAI YSSQMLPMPS STLIPQRSSH  780
ELPMHLPMSL PSHDFYMGTM PTLTSVPIYS NPMLQTTLPS NNVPQWYTGG SGGYNTISNY  840
QQHSNGMVNF LQVQLMNLFV FPVPLKHLFI GPCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-131	FAR1 family protein