PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026395125.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | FAR1 | ||||||||
Protein Properties | Length: 667aa MW: 76582.4 Da PI: 7.2693 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 27.3 | 1.2e-08 | 118 | 197 | 16 | 90 |
FAR1 16 kskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +s+skk + +g+ + t+ C ++g +++kkk e ++r++ + ++gC +lk + +kw + + HnHel+ XP_026395125.1 118 ISHSKK-TLKGKGSRITLGCERSGWYTDHKKKslqpkpPEPRKRKSRTRKCGCPFQLKCDWVEGNKWTLRAVCGRHNHELS 197 445444.47777899*********99999999999998888888999999**********999****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 667 aa Download sequence |
MVDVNFGREI MEVDSSPEGS FDSGRHLEST ATQMVDGPIN SSPCMEIIPS VGSPQLDVDP 60 GVDGPQLVET TSITETYSQP VTVDLTPFFV TDQVFDSREA IIEWCQEVGK KNNTVLVISH 120 SKKTLKGKGS RITLGCERSG WYTDHKKKSL QPKPPEPRKR KSRTRKCGCP FQLKCDWVEG 180 NKWTLRAVCG RHNHELSDTL TGHAYAGRLK EEEKQLVLHL TATGVPPQQV LIALKEKSKE 240 NYSTLKTIYN VKSKHRKSQV EGKSAMQQVM ELLARYHYVE KHRSNEETNE VRDIFWAHPE 300 SMLLAKCFPS VLMVDSTCKT NRFKMPLIHI VGISSTGKLF TVAFAFMEAD TEQHYIWALT 360 QLKWMYMPNT LPSLLVTDRE SALVNAIDIV FPRSSRLLCT WHLNQQVQAN CEKAFEDNDE 420 WEQFHTDWNH VWQAETMDEY GDAYADFATK WAPKYPSCIV YLRDTWLIQK EKFALAWTNK 480 IKHFGNTTTK ADKEHENLRK YLVSAVDSYS TCWKAMHNMI KDEIAQIKFS FELSLTTLNQ 540 EHLSPALEEL RNHVSHKALE LVLFEIHRAE NLGNEESSCS CFLHSTHGLP CAHELVKYVP 600 QGKAIPLLNI DSHWKQLSIV PTQELYNGFD VLPEFQLLRQ KWREAVEPRR SLLLQKIKDI 660 ATFKPRN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 161 | KKKSLQPKPPEPRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-19 | FAR1 family protein |