PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395083.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1296aa MW: 146548 Da PI: 7.2576

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	108	237	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........................................tekerrtr 55 fYneYA vGFsvrk+k++ks+ +g+ r+f+Cskeg+++++ ++ +++ + + XP_026395083.1 108 FYNEYAAIVGFSVRKDKTRKSNIDGSYLFRRFCCSKEGYPRKSLENggngvntnigigmqvkdgklvkmeaariqpvprvgrrakldMKRRAEIQ 202 9****************************************999**********************************98767777788 PP FAR1 56 aetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + r+gC+a+l vk+++dg+w v+k+++eHnHe++ XP_026395083.1 203 QRMRVGCNARLDVKRTTDGRWIVQKFVEEHNHECV 237 999***************************986 PP
2	FAR1	78.6	1.1e-24	295	396	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 fYn+YA+++GF vrk+k+++s+ +g+ r+++Cskeg+r+++ ++ + + r ++tr+gC+akl+vkk++dgkw+v+k+ + XP_026395083.1 295 FYNAYARTLGFVVRKDKTRRSNIDGSLLFRRLCCSKEGYRRKNCENddndrkqmiggviVKVRTRILPVTRVGCNAKLEVKKSTDGKWVVQKFIE 389 9**************************************999988899999999987777777889*********************** PP FAR1 84 eHnHela 90 eHnHel XP_026395083.1 390 EHNHELD 396 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1296 aa Download sequence
MIVMEESTSQ FDSLGADENE IFGDVAEAEC QLVLGVDKVV SPTHDTATDN NTQNDIHSHC 60 HTHSHDTTDN TTHDHVHNRE EATTSSSTCF TKPFVGMEFE TLQKAFLFYN EYAAIVGFSV 120 RKDKTRKSNI DGSYLFRRFC CSKEGYPRKS LENGGNGVNT NIGIGMQVKD GKLVKMEAAR 180 IQPVPRVGRR AKLDMKRRAE IQQRMRVGCN ARLDVKRTTD GRWIVQKFVE EHNHECVSLD 240 ETHLLRSHRS RRAARALLDR NGVGELPSSE ERIINEVPKP SVGMEFESPH KAYLFYNAYA 300 RTLGFVVRKD KTRRSNIDGS LLFRRLCCSK EGYRRKNCEN DDNDRKQMIG GVIVKVRTRI 360 LPVTRVGCNA KLEVKKSTDG KWVVQKFIEE HNHELDRLGD MLLFKTHKLD KPDQEALLDS 420 VTDGSARPKK VSSYIMSEAG GSEKISFIEA RLRNRMKKKK RRKLEKGDTQ IILNYFRRMQ 480 AENPAFFYAI QVDEEDQMSG CFWADARSRS DFGHFGDVVY FETTYGANTC GRPFTPLLGV 540 NNHLQTVLFG CAIILNETEE SFAWLLETLL KAMYGRHPVT VITDQDAEME KAIGQLLPGT 600 NHCLSLWHIL QNTAKNLSHL YNKDDIFSTD YKNCIYEPQL CEEFESRWES LLDKFDLRDN 660 EWLGYLYIRR HKWVPVYSKH IFHAHTMSIE QNESMHSFFN GYVLSKALPM TEFISQYEKA 720 IFDSREKETY EDSISRQTHP VLKSELPLEK QAAESYTRLV FQEFHKEFTD SFNYMAVETE 780 MLGTIKTFLV SRWGQNSSWL VKFDSCDNDT KVTCSCQSFE SVGILCRHIL KVFTATNVML 840 IPDVYIRKRW TKRAKCGMPS HKNESVVGSE CESSLALRYR NLCQLALTLS AKGALSFKAY 900 QTASCAVEMK LREVEKVPEG DIIVSQLDVQ GTSASHSPIE AVNNNQISNR LVCADNPTVA 960 SGSQIASSDP PRVRPRGRPP KKVMPTLLEN HRKKKARTEP ESSEHNGVHS HPRSEAIASE 1020 PIVPCNFGGK DGQETHNSPR LSNLCPNICV YVPGPAGDLN DQYHSTDTSG FGEPFAGLSC 1080 IQSSEHNIFD LNQELTVGPA SIPNPQTFQE LTVGPASIPN PQTSHFDLNQ VNHVVRPPLD 1140 SRLLPSSGWF KLNFGGCSKE IYFEDSDRRR IGGYGGAVSL SDGSIIKSYA GSAAEVQAVE 1200 AEILGLWNGL KLLSALPSGP VWIEGDSDHV IKWLRRESEI PWRFTPMFFE IEAIMSRLVL 1260 GRITHIHQEG NSVAGKLANE GLSKDSLVIW DQMPSL

Sequence ? help Back to Top

Protein Sequence Length: 1296 aa Download sequence

MIVMEESTSQ FDSLGADENE IFGDVAEAEC QLVLGVDKVV SPTHDTATDN NTQNDIHSHC  60
HTHSHDTTDN TTHDHVHNRE EATTSSSTCF TKPFVGMEFE TLQKAFLFYN EYAAIVGFSV  120
RKDKTRKSNI DGSYLFRRFC CSKEGYPRKS LENGGNGVNT NIGIGMQVKD GKLVKMEAAR  180
IQPVPRVGRR AKLDMKRRAE IQQRMRVGCN ARLDVKRTTD GRWIVQKFVE EHNHECVSLD  240
ETHLLRSHRS RRAARALLDR NGVGELPSSE ERIINEVPKP SVGMEFESPH KAYLFYNAYA  300
RTLGFVVRKD KTRRSNIDGS LLFRRLCCSK EGYRRKNCEN DDNDRKQMIG GVIVKVRTRI  360
LPVTRVGCNA KLEVKKSTDG KWVVQKFIEE HNHELDRLGD MLLFKTHKLD KPDQEALLDS  420
VTDGSARPKK VSSYIMSEAG GSEKISFIEA RLRNRMKKKK RRKLEKGDTQ IILNYFRRMQ  480
AENPAFFYAI QVDEEDQMSG CFWADARSRS DFGHFGDVVY FETTYGANTC GRPFTPLLGV  540
NNHLQTVLFG CAIILNETEE SFAWLLETLL KAMYGRHPVT VITDQDAEME KAIGQLLPGT  600
NHCLSLWHIL QNTAKNLSHL YNKDDIFSTD YKNCIYEPQL CEEFESRWES LLDKFDLRDN  660
EWLGYLYIRR HKWVPVYSKH IFHAHTMSIE QNESMHSFFN GYVLSKALPM TEFISQYEKA  720
IFDSREKETY EDSISRQTHP VLKSELPLEK QAAESYTRLV FQEFHKEFTD SFNYMAVETE  780
MLGTIKTFLV SRWGQNSSWL VKFDSCDNDT KVTCSCQSFE SVGILCRHIL KVFTATNVML  840
IPDVYIRKRW TKRAKCGMPS HKNESVVGSE CESSLALRYR NLCQLALTLS AKGALSFKAY  900
QTASCAVEMK LREVEKVPEG DIIVSQLDVQ GTSASHSPIE AVNNNQISNR LVCADNPTVA  960
SGSQIASSDP PRVRPRGRPP KKVMPTLLEN HRKKKARTEP ESSEHNGVHS HPRSEAIASE  1020
PIVPCNFGGK DGQETHNSPR LSNLCPNICV YVPGPAGDLN DQYHSTDTSG FGEPFAGLSC  1080
IQSSEHNIFD LNQELTVGPA SIPNPQTFQE LTVGPASIPN PQTSHFDLNQ VNHVVRPPLD  1140
SRLLPSSGWF KLNFGGCSKE IYFEDSDRRR IGGYGGAVSL SDGSIIKSYA GSAAEVQAVE  1200
AEILGLWNGL KLLSALPSGP VWIEGDSDHV IKWLRRESEI PWRFTPMFFE IEAIMSRLVL  1260
GRITHIHQEG NSVAGKLANE GLSKDSLVIW DQMPSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	457	462	KKKKRR
2	457	463	KKKKRRK
3	457	464	KKKKRRKL
4	458	463	KKKKRR
5	458	463	KKKRRK
6	459	463	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-142	FAR1 family protein