PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394828.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 1080aa MW: 120762 Da PI: 8.1942

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394828.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	122.1	2.5e-38	163	240	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+ +ls+ak+yhrrhkvCe+hsk++++lv +++qrfCqqCsrfh l +fD++krsCrrrLa+hn+rrrk+q+ XP_026394828.1 163 MCQVDDCRGNLSQAKDYHRRHKVCEIHSKTTKALVGKQMQRFCQQCSRFHPLLDFDDGKRSCRRRLAGHNRRRRKTQQ 240 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1080 aa Download sequence
MEQVEAQIRR PVFMQRHHPV QAACFSQEPP PMSRKRKLSI NTSNWPQQHT PPFQQQQYGL 60 PNSEKNWNRN VWMWDSVKFV AKPLEADVTR NRSSAAVGAA AVTDQRRKGE ENLKSSMNQD 120 DRENLALNLG GSLYSVDEHV SRPNKRIRSG SPGGVNGSAS YPMCQVDDCR GNLSQAKDYH 180 RRHKVCEIHS KTTKALVGKQ MQRFCQQCSR FHPLLDFDDG KRSCRRRLAG HNRRRRKTQQ 240 EDVSSRLLVP GKLENNGSGN SEIVNIIQAL ARLQGTNMDR NANISSIPDR DWLIMILNKM 300 NSLPVASNNA ARLALHGGFD LNVSQEVSTE SSNKVNENFS ASSTMDLLAI FSAALKECSP 360 EVLAVLSQTS SHNDDDKLSY HKNSSPVSTL AGGDGTATFQ SRLDPSSCQV QECRPSFPLQ 420 LFGSSSDSDS PPNQGSPWKY YSSDSSNPIE ERSPAFSSPG TTLLFPLRTP SSEIMKHESI 480 SITGENNVED TPPGGSTLLE LFKHDNGRVA NSSIRSPSGQ PGYTSQSGSD QSPTSSSDSH 540 DRTGRIIFKL FDKDPSNLPG NLRAEIINWL SHSPSDIESY IRPGCVILSI YTVAPSRTWE 600 QFQQDLLQRV KLLVNEQNSD FWRNGRFLIH TGRQLASHKD GNFRLCKAWR TQNSPELMFV 660 SPLAVVGGQQ TTLLLRGQNL RVPGTKIHCA YMGGYTSKEV TGSAGTIYDR TSAESFNFSS 720 EIPNVLGRCF IEVENGFKGN SFPLIIADSS ICQELRLLEP ELEIYASVSD GTAEQQNLDS 780 ERLRSREDIL HFLHELGWLF QRKNIPSSFD GLDFSHGRFK FLFIFSIERD WCALVKMLLD 840 ILVERNMKEG ALSRESLENL SDIHLLHRAV KRKCRSMVDL LIKYSLTSTT GAPETYLFSP 900 SQMGPGGLTP LHLAACLHDS KEMVDILTED PQKVGMDCWY SLYDANGQSP YNYASMRNNH 960 YYNRMVDRKV AVRKQGKVSI DIEDDEISSS HQQQQQQPQP QPQLQLVQGR RRPCSKCAVV 1020 PPTGRFMRMP GTQGLLHVPY VHSMLAIAAM CVCVCLLMRG SPQIGDIPPF MWAHLGSGIM

Sequence ? help Back to Top

Protein Sequence Length: 1080 aa Download sequence

MEQVEAQIRR PVFMQRHHPV QAACFSQEPP PMSRKRKLSI NTSNWPQQHT PPFQQQQYGL  60
PNSEKNWNRN VWMWDSVKFV AKPLEADVTR NRSSAAVGAA AVTDQRRKGE ENLKSSMNQD  120
DRENLALNLG GSLYSVDEHV SRPNKRIRSG SPGGVNGSAS YPMCQVDDCR GNLSQAKDYH  180
RRHKVCEIHS KTTKALVGKQ MQRFCQQCSR FHPLLDFDDG KRSCRRRLAG HNRRRRKTQQ  240
EDVSSRLLVP GKLENNGSGN SEIVNIIQAL ARLQGTNMDR NANISSIPDR DWLIMILNKM  300
NSLPVASNNA ARLALHGGFD LNVSQEVSTE SSNKVNENFS ASSTMDLLAI FSAALKECSP  360
EVLAVLSQTS SHNDDDKLSY HKNSSPVSTL AGGDGTATFQ SRLDPSSCQV QECRPSFPLQ  420
LFGSSSDSDS PPNQGSPWKY YSSDSSNPIE ERSPAFSSPG TTLLFPLRTP SSEIMKHESI  480
SITGENNVED TPPGGSTLLE LFKHDNGRVA NSSIRSPSGQ PGYTSQSGSD QSPTSSSDSH  540
DRTGRIIFKL FDKDPSNLPG NLRAEIINWL SHSPSDIESY IRPGCVILSI YTVAPSRTWE  600
QFQQDLLQRV KLLVNEQNSD FWRNGRFLIH TGRQLASHKD GNFRLCKAWR TQNSPELMFV  660
SPLAVVGGQQ TTLLLRGQNL RVPGTKIHCA YMGGYTSKEV TGSAGTIYDR TSAESFNFSS  720
EIPNVLGRCF IEVENGFKGN SFPLIIADSS ICQELRLLEP ELEIYASVSD GTAEQQNLDS  780
ERLRSREDIL HFLHELGWLF QRKNIPSSFD GLDFSHGRFK FLFIFSIERD WCALVKMLLD  840
ILVERNMKEG ALSRESLENL SDIHLLHRAV KRKCRSMVDL LIKYSLTSTT GAPETYLFSP  900
SQMGPGGLTP LHLAACLHDS KEMVDILTED PQKVGMDCWY SLYDANGQSP YNYASMRNNH  960
YYNRMVDRKV AVRKQGKVSI DIEDDEISSS HQQQQQQPQP QPQLQLVQGR RRPCSKCAVV  1020
PPTGRFMRMP GTQGLLHVPY VHSMLAIAAM CVCVCLLMRG SPQIGDIPPF MWAHLGSGIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein