PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026394502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25589.1 Da PI: 8.4855 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.6 | 3.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCda+va+++fsstgkl+eyss XP_026394502.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSILCDADVALLVFSSTGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ + + + + akL+k i + r +R++ Ge+L+ L+++eLqqLe+ Le +l ++ ++K e ++++i+ lq+k el een++Lr++++e XP_026394502.1 82 PASLELQLENSNCAKLQKDIAEQSRRLRQMRGEELHGLNIEELQQLEKTLEAGLGRVLETKGERIMKEINSLQRKGMELLEENERLRQQMAE 173 5666778888999****************************************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSILCD ADVALLVFSS TGKLFEYSSS 60 SMKGIIERRE LHSKNLQKTN QPASLELQLE NSNCAKLQKD IAEQSRRLRQ MRGEELHGLN 120 IEELQQLEKT LEAGLGRVLE TKGERIMKEI NSLQRKGMEL LEENERLRQQ MAEISRGNQR 180 STVLINSDKE GGQSSESITN VCSSISGPPL EDDSSDTSLK LGLPFPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22540.1 | 8e-94 | MIKC_MADS family protein |