PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026393760.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

E2F/DP

Protein Properties

Length: 531aa MW: 57914.1 Da PI: 4.8879

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026393760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.5	8.2e-27	203	268	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l+ ++++gi++ln+ a+ L +v ++RRiYDi+NVLe+++liek++kn+irwkg XP_026393760.1 203 RYDSSLGLLTKKFISLILEAKDGILDLNKTADIL---KV--QKRRIYDITNVLEGIGLIEKTSKNNIRWKG 268 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MSVSEKRSSN PISSNPQFQL NSRNPQSTSS SSSGFANGGS TLNHRQYPFS PSSTASTTKP 60 SSAFSLSSLS SSLVGCNRTA VAAAGGGGGG KLETFYRDAT AKAIVEKDGR AQAGEWVTNK 120 EQLEAISSQG TSMSGVGCKR YQTGERVNGQ GYTDAANSPL HPASAGTKRY GRTSTKNTSS 180 GPQTSQSTDD FAANLLTPTG SCRYDSSLGL LTKKFISLIL EAKDGILDLN KTADILKVQK 240 RRIYDITNVL EGIGLIEKTS KNNIRWKGLG MQMPMDLDDE VTKLKADIES EYDEERRLDT 300 KIRAKQERLR SLGADENCQR FLFLTEEDIM SIPNYQNNTL IAIKAPQASS LEVPDPDEVV 360 DYPQKHFRMI VRSTTGPIDV YLVSKYQEGP EDIIVKRGGQ IHSNMETSDF RREGTCSRQV 420 QDTGCLSNAQ QDRENQNVSC DSLGSLNSAT GIQKIVPSDA NIDDDYWFRS DLEVSITDLW 480 ATEDWAEVDE LLKDNDELPE STSNATSTQH VPQVPIPSSG VVVNGLCMEK T

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MSVSEKRSSN PISSNPQFQL NSRNPQSTSS SSSGFANGGS TLNHRQYPFS PSSTASTTKP  60
SSAFSLSSLS SSLVGCNRTA VAAAGGGGGG KLETFYRDAT AKAIVEKDGR AQAGEWVTNK  120
EQLEAISSQG TSMSGVGCKR YQTGERVNGQ GYTDAANSPL HPASAGTKRY GRTSTKNTSS  180
GPQTSQSTDD FAANLLTPTG SCRYDSSLGL LTKKFISLIL EAKDGILDLN KTADILKVQK  240
RRIYDITNVL EGIGLIEKTS KNNIRWKGLG MQMPMDLDDE VTKLKADIES EYDEERRLDT  300
KIRAKQERLR SLGADENCQR FLFLTEEDIM SIPNYQNNTL IAIKAPQASS LEVPDPDEVV  360
DYPQKHFRMI VRSTTGPIDV YLVSKYQEGP EDIIVKRGGQ IHSNMETSDF RREGTCSRQV  420
QDTGCLSNAQ QDRENQNVSC DSLGSLNSAT GIQKIVPSDA NIDDDYWFRS DLEVSITDLW  480
ATEDWAEVDE LLKDNDELPE STSNATSTQH VPQVPIPSSG VVVNGLCMEK T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	242	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	1e-92	E2F/DP family protein