PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393459.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 278aa    MW: 29561.6 Da    PI: 7.3712
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393459.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021110132123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ CgksF +   L  H  +H
  XP_026393459.1 110 YSCNVCGKSFGSYQALGGHKASH 132
                     99********9999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MALETSSFNH HFKHTVDTEE EEDLLNSHQD APWAKRKRSK RSRFSNDSSS PPPPPQTEEE  60
YLALCLIMLA QDRSSTIISS STNATTLAAA APQPSTSAAA MASEKVVNSY SCNVCGKSFG  120
SYQALGGHKA SHRTKVTVLP TSTTTALPTA SDDQSTTTMN NPVMGNRLGK ATRVHECSIC  180
HKCFPSGQAL GGHKRCHYEG TTGVAGGALG GNHSGGAGNH SGVTSTTTNT SDGAGTNHRN  240
FDLNLLPVQL PSEFWPGFNN IEDEVQSPLT MKKNKVSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.21e-30C2H2 family protein