PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026393053.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 701aa MW: 78261.4 Da PI: 6.2851

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026393053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	180	199	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C Cgk+F+++ +L H+r XP_026393053.1 180 TCRVCGKTFPSRNSLFGHMR 199 6******************8 PP
2	zf-C2H2	12.9	0.00032	610	632	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cgk+F++ L H r H XP_026393053.1 610 HRCSICGKTFPTGQALGGHKRHH 632 79*************99999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MEDDQEKQFE FLKNHHLDHG DHFPNGSSLP PMKNSRMLKI KLKCNSNDSN KEYGDEEKET 60 RAGDVCDKDF SSRKALGIHM SLHNLGSQQS EYHQRNYFNK HEEHEEEEEN DYDNNNNDEV 120 TWKGIKNENK CSSTELVMGK NHKHHQQIFI DVSAATSAAT AAAVVNSNYI NLSSDNNDNT 180 CRVCGKTFPS RNSLFGHMRC HPEREWRGIE PPTAAMIAKD KNYSNSSSSI SSDSREGQKV 240 DNPMMIDSAR QNTPAKRKMK PSAPTTNRCS SPYSDLVDID LPKWSMTAKR GRRSLTDSGE 300 LNNNEKNIDV DYSDEEEPEN VDDECTLPTD PGACHLMMLV MAAAQSESTP VDLSALQSTI 360 KQRRNDKSQQ DDDYSNNYSC SEVEKESSEC KGVNDQEILN CNKRLRTGNY PKGGLSLNKK 420 KKKRPKVHNK ESEIGYIYDR TSKVIVEDSD VEFGDEYTKL SDMIMRKKRK TMKLKDLARM 480 VDDGGDDVKK QEVEFSIAER FNCSSCNKSF PSHQALGGHR SSHKSNKINQ PKYKSNVEEL 540 AGGGLVITRE ADEDEGHDFY GLVNNDNANI KQTLEDFSFE VKSVESISKS KSKLMAAAMT 600 SSSNISMQTH RCSICGKTFP TGQALGGHKR HHGTSPSPSP SPSAVVDRIP PPLSSSSSVG 660 SAEAFSSTNT TITTNSFTTA ATGGHRVVFD FDLNELPVME E

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MEDDQEKQFE FLKNHHLDHG DHFPNGSSLP PMKNSRMLKI KLKCNSNDSN KEYGDEEKET  60
RAGDVCDKDF SSRKALGIHM SLHNLGSQQS EYHQRNYFNK HEEHEEEEEN DYDNNNNDEV  120
TWKGIKNENK CSSTELVMGK NHKHHQQIFI DVSAATSAAT AAAVVNSNYI NLSSDNNDNT  180
CRVCGKTFPS RNSLFGHMRC HPEREWRGIE PPTAAMIAKD KNYSNSSSSI SSDSREGQKV  240
DNPMMIDSAR QNTPAKRKMK PSAPTTNRCS SPYSDLVDID LPKWSMTAKR GRRSLTDSGE  300
LNNNEKNIDV DYSDEEEPEN VDDECTLPTD PGACHLMMLV MAAAQSESTP VDLSALQSTI  360
KQRRNDKSQQ DDDYSNNYSC SEVEKESSEC KGVNDQEILN CNKRLRTGNY PKGGLSLNKK  420
KKKRPKVHNK ESEIGYIYDR TSKVIVEDSD VEFGDEYTKL SDMIMRKKRK TMKLKDLARM  480
VDDGGDDVKK QEVEFSIAER FNCSSCNKSF PSHQALGGHR SSHKSNKINQ PKYKSNVEEL  540
AGGGLVITRE ADEDEGHDFY GLVNNDNANI KQTLEDFSFE VKSVESISKS KSKLMAAAMT  600
SSSNISMQTH RCSICGKTFP TGQALGGHKR HHGTSPSPSP SPSAVVDRIP PPLSSSSSVG  660
SAEAFSSTNT TITTNSFTTA ATGGHRVVFD FDLNELPVME E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	4e-12	C2H2 family protein