PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392919.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 497aa MW: 56924 Da PI: 5.1396

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.9	2.6e-08	106	142	1	36
trihelix 1 rWtkqevlaLiearremeerlr.rgklkkplWeevsk 36 rW+++e laL+++r+em++++r +++ k+plWe vs+ XP_026392919.1 106 RWPQSEALALLKIRSEMDSQFRvSSNPKGPLWEIVSR 142 8*******************44789*****997 PP
2	trihelix	92	6e-29	347	431	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+evlaLi +r+ me+++r+g++k p Wee+s m++ gf++++k+Ckekwen+nk++k+ + + kkr se+ +tcpyf +l+ XP_026392919.1 347 RWPKHEVLALISLRTAMEHKFRTGAAKIPMWEEISLGMASMGFTKTAKKCKEKWENINKYFKRAASSGKKR-SENAKTCPYFYELD 431 8******************************************************************98.77888***9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MSLTDLSEEI SPFSVTGNNL LDNYQQTPSS SEIEFRSDLP LQKLRPVRNN QFVTEFTNGS 60 ANFDSISPDV KNEEWFCSPV NDLPRKDDGG GGVGVDAVGG DSENLRWPQS EALALLKIRS 120 EMDSQFRVSS NPKGPLWEIV SRLQDTIRKT TQEPNVSRME EEVGVKTTHS GSADTVLHEF 180 GSDAGNENVD DEFGESLSRK RKREIRNELK DHFEDLVSKM MKKQEDMYKV LLETIEQKEK 240 DRITREETWR NLERERMRKE EERRAQDTQR SLALLSFLGK FFGQPEINTP EPLRQQEINT 300 PQSTGQQIIN IPQSPELCRE IVLHDQSHQK KQKVEGSEYM LDANFKRWPK HEVLALISLR 360 TAMEHKFRTG AAKIPMWEEI SLGMASMGFT KTAKKCKEKW ENINKYFKRA ASSGKKRSEN 420 AKTCPYFYEL DMLYKKRLIN PEKAPEAVKE EPQEKEPQEN NSNGEMLTTL AQVCDLFSMS 480 EPLLEPAVGQ SGSMDLS

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MSLTDLSEEI SPFSVTGNNL LDNYQQTPSS SEIEFRSDLP LQKLRPVRNN QFVTEFTNGS  60
ANFDSISPDV KNEEWFCSPV NDLPRKDDGG GGVGVDAVGG DSENLRWPQS EALALLKIRS  120
EMDSQFRVSS NPKGPLWEIV SRLQDTIRKT TQEPNVSRME EEVGVKTTHS GSADTVLHEF  180
GSDAGNENVD DEFGESLSRK RKREIRNELK DHFEDLVSKM MKKQEDMYKV LLETIEQKEK  240
DRITREETWR NLERERMRKE EERRAQDTQR SLALLSFLGK FFGQPEINTP EPLRQQEINT  300
PQSTGQQIIN IPQSPELCRE IVLHDQSHQK KQKVEGSEYM LDANFKRWPK HEVLALISLR  360
TAMEHKFRTG AAKIPMWEEI SLGMASMGFT KTAKKCKEKW ENINKYFKRA ASSGKKRSEN  420
AKTCPYFYEL DMLYKKRLIN PEKAPEAVKE EPQEKEPQEN NSNGEMLTTL AQVCDLFSMS  480
EPLLEPAVGQ SGSMDLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	2e-39	Trihelix family protein