PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026392030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 28909.7 Da PI: 9.0025 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2.1e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ XP_026392030.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSNRGRLYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 112.9 | 3.2e-37 | 82 | 174 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLq..reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ea+++ +qqe++kL+++i Lq +++Rhl+Ge L+s+s+keL+qLe +Lek++++iRskKnell+++ie++qk+e +lq++n++Lr+k++ XP_026392030.1 82 ASEANTQFYQQEATKLRQQIGILQnsNSLRHLMGEALSSMSVKELKQLEGRLEKGISRIRSKKNELLFAEIEYMQKRELDLQNDNMYLRAKIA 174 7899********************99899**************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSN RGRLYEYANN 60 SVKSTIDRYK KTCADPSSTI CASEANTQFY QQEATKLRQQ IGILQNSNSL RHLMGEALSS 120 MSVKELKQLE GRLEKGISRI RSKKNELLFA EIEYMQKREL DLQNDNMYLR AKIADNERAG 180 QQMNLMPGNE YDVMTSSAYD SRNFLQVNNL LESANHHYSR QEQTALQLGA KIEDIKPLQY 240 SSYGFGGEEA YGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-109 | MIKC_MADS family protein |