PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392027.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 866aa MW: 99035.8 Da PI: 7.1694

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392027.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.4	9.2e-08	94	162	23	89
FAR1 23 krngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 k+ g+ ++ C ++g +++k++ ++ ++r+r+++++gC kl+ + +kw++ + +HnHe+ XP_026392027.1 94 KQGGKGSVVELGCERSGVYSRRKSNisKSGQKRKRESKKCGCPLKLRCTCIGGNKWKLRVCCGKHNHEV 162 55667788899*****9999999877889999*******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 866 aa Download sequence
MEDVIMIEDD DIVKEEPQSF PSEGLNVDGG LVNHPQNETN INEENDPVSM EGIDLTQCFQ 60 IDKEFDSREA IIKWCQEVAG KNNTVLATIK SVKKQGGKGS VVELGCERSG VYSRRKSNIS 120 KSGQKRKRES KKCGCPLKLR CTCIGGNKWK LRVCCGKHNH EVGRTQAVDV LSMEDAVIIE 180 DNNAVKENLS TEGGSSNGSC REASRSLNAI RDSESRPSDD FNVKKGSVSQ PEKDTSVTEE 240 EVLVFEEGIG LTHCCQTDKD LDGEKCSDSH LQKDTNVMEE DVSIFKEGID LTPCFQTDKE 300 FDTREAVIHW CQEVARSNNT GLMISKTLKK PGGKGSLVEL GCVRSGAYRS HRKKGDKVLR 360 KRKVLTKKCR CPFKLRSTCV EGNKWKLRVR CGRHNHEVEC IPPGHSYFRR WKEDEDQLLC 420 ELTASGLRPR QVLHALKERS KENFLDIKTI YNRRTRLKLH GTGRSSVMQQ VMKLSAQYHY 480 MEWHRKDKET CELKDIIWAH PESTLLAQCF PFMLMIDCTY KTNKFKIPFF HVAGVSSVGT 540 SFTVAYAFIE EETEEHFSWA LMQLKSLYSP NNLPSVVLVN GELPLINAIS IVFPGADKLI 600 CPNHIAKTIE INCKNAFENS EMWSNFCLDW ENVWKAETKE DYVDMYTEFV TTWVARNVTC 660 ITYIRDTWLV HKESFIVAWT QKIKHFGYTV INRVENERDQ LKKCMESSGH SFFPCWETLH 720 NMINSQITHI KTSFDRSLTS VNRGHRSPIF SELRNQVSQR ALELLQLELD KSSNQSSDMG 780 RCRCLIRATH GLPCPHEVVK YTQEGSPIPL SAIDPQWKQL SIVPRVETNI DFDWLPEVQL 840 LWQRWIESEE LERCSLAEKI KELALC

Sequence ? help Back to Top

Protein Sequence Length: 866 aa Download sequence

MEDVIMIEDD DIVKEEPQSF PSEGLNVDGG LVNHPQNETN INEENDPVSM EGIDLTQCFQ  60
IDKEFDSREA IIKWCQEVAG KNNTVLATIK SVKKQGGKGS VVELGCERSG VYSRRKSNIS  120
KSGQKRKRES KKCGCPLKLR CTCIGGNKWK LRVCCGKHNH EVGRTQAVDV LSMEDAVIIE  180
DNNAVKENLS TEGGSSNGSC REASRSLNAI RDSESRPSDD FNVKKGSVSQ PEKDTSVTEE  240
EVLVFEEGIG LTHCCQTDKD LDGEKCSDSH LQKDTNVMEE DVSIFKEGID LTPCFQTDKE  300
FDTREAVIHW CQEVARSNNT GLMISKTLKK PGGKGSLVEL GCVRSGAYRS HRKKGDKVLR  360
KRKVLTKKCR CPFKLRSTCV EGNKWKLRVR CGRHNHEVEC IPPGHSYFRR WKEDEDQLLC  420
ELTASGLRPR QVLHALKERS KENFLDIKTI YNRRTRLKLH GTGRSSVMQQ VMKLSAQYHY  480
MEWHRKDKET CELKDIIWAH PESTLLAQCF PFMLMIDCTY KTNKFKIPFF HVAGVSSVGT  540
SFTVAYAFIE EETEEHFSWA LMQLKSLYSP NNLPSVVLVN GELPLINAIS IVFPGADKLI  600
CPNHIAKTIE INCKNAFENS EMWSNFCLDW ENVWKAETKE DYVDMYTEFV TTWVARNVTC  660
ITYIRDTWLV HKESFIVAWT QKIKHFGYTV INRVENERDQ LKKCMESSGH SFFPCWETLH  720
NMINSQITHI KTSFDRSLTS VNRGHRSPIF SELRNQVSQR ALELLQLELD KSSNQSSDMG  780
RCRCLIRATH GLPCPHEVVK YTQEGSPIPL SAIDPQWKQL SIVPRVETNI DFDWLPEVQL  840
LWQRWIESEE LERCSLAEKI KELALC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	128	RRKSNISKSGQKRKR
2	356	362	DKVLRKR
3	357	363	KVLRKRK
4	360	386	RKRKVLTKKCRCPFKLRSTCVEGNKWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-15	FAR1 family protein