PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026391627.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 417aa MW: 46313.5 Da PI: 8.2651

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026391627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.6	1.4e-33	35	89	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_026391627.1 35 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 89 79****************************************************8 PP
2	Myb_DNA-binding	72.2	7.8e-23	37	88	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_026391627.1 37 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 88 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MFHSKKLPTT MNSSSSSASM CVQGDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDK 60 ATPKTIMRVM GVKGLTLYHL KSHLQKFRLG KQPHKDFNDH SLKDVDHHMR GSALDLQRNG 120 ASSSGIMCRG MNDRNNVHIN DALRMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQTILEK 180 ACQTLSNDSS LASGSSYKSR ADVSSRNNQG GIISDMGGSS LKDFGGSSLN NNFPSLQDLN 240 IYGGVDNHHQ LDSMQQQNEK SSSFDAFFQS NNNSDNFLGN RKRPSTSSYG SSSKNHLVWT 300 EDDMRLQDLG SAVGCLGSQN DHEGDQDSSK INEHIQIGCL STIDGGNEMD SVGDVYEAKP 360 VISGHHHHQN NVGERKYDPT SMSSKLERPS PRRMPFQVDR VSNPMIKSQG RSVPYAG

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MFHSKKLPTT MNSSSSSASM CVQGDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDK  60
ATPKTIMRVM GVKGLTLYHL KSHLQKFRLG KQPHKDFNDH SLKDVDHHMR GSALDLQRNG  120
ASSSGIMCRG MNDRNNVHIN DALRMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQTILEK  180
ACQTLSNDSS LASGSSYKSR ADVSSRNNQG GIISDMGGSS LKDFGGSSLN NNFPSLQDLN  240
IYGGVDNHHQ LDSMQQQNEK SSSFDAFFQS NNNSDNFLGN RKRPSTSSYG SSSKNHLVWT  300
EDDMRLQDLG SAVGCLGSQN DHEGDQDSSK INEHIQIGCL STIDGGNEMD SVGDVYEAKP  360
VISGHHHHQN NVGERKYDPT SMSSKLERPS PRRMPFQVDR VSNPMIKSQG RSVPYAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-107	G2-like family protein