PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026391165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | Trihelix | ||||||||
Protein Properties | Length: 331aa MW: 38029.6 Da PI: 5.6549 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 56.6 | 6.7e-18 | 40 | 122 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+ e+ Lie++r+++ +l+rg+lk+ +Weev++ + + gf ++s++qC++k+e+l+kry+ +k++ s++ yfd ++ XP_026391165.1 40 WTHLETVNLIEVYRNKWYSLKRGQLKASQWEEVANTIaSNCGFdepSKSSTQCRHKMEKLRKRYRSEKQRPVA------SNWIYFDLMD 122 **********************************99964556654489*******************999886......6999**9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MSQQPSEEKI PSSSETTKPP PSSSSTAIPT PPKKIPPIPW THLETVNLIE VYRNKWYSLK 60 RGQLKASQWE EVANTIASNC GFDEPSKSST QCRHKMEKLR KRYRSEKQRP VASNWIYFDL 120 MDQMERGIFP LTVKPISSIP PPAPGQNQST DDDEEDEVDD DNEDNDGFNN VIRSRSINHI 180 LRRPPIVSRV VDKRRSNSYS LPPQQQQPQV TQNWKSSRRP LERKRKSFEM EEEEVEEEEE 240 VEEENGFGGG GDGGLGGRGG ELLMELASVI RKFGEGFVKT ENMKMEMMRE LERNRMEMEA 300 KRTEMIINSQ NRIIDTINKA FASRKKAKEE A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 8e-27 | Trihelix family protein |