PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026391012.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 452aa MW: 52347.5 Da PI: 4.7484

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026391012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.9	2.7e-23	327	411	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k+ev+aLi +r+ +e ++ +g++k + Wee+s m + gf+r++k+Ckekw+++ +++++ + ++k+ e+ +t+pyf++l+ XP_026391012.1 327 RWPKHEVQALISLRTAVEPKFLSGASKLQMWEEISLGMVSMGFTRTAKKCKEKWQKMYGYFRRAAGSSKQP-GENAKTYPYFQELD 411 8**************************************************************999986.78888*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSLTLDLSEE ISPFSVTWRN NKLLDTYQQE PCSSELKSRS DLQSLQKLLP VRNNFTEFTK 60 CSTNYESFPP DLNSDEWFCL SEKQDDGGGG VGGADATGEN HRLGMDSQVR VSSNPEPPLP 120 EIVSRFQDTI QEPKISPMEN EEVAVKATHS DTEFGSDVAG NENVDDDLGE SLCIKKRKRE 180 IQEELKGHFE ELVNKMMNKQ EDMYKVLLER QDDMYKVLLE KIEQKEKHRI TREETWRNLE 240 MERMRKETEQ MEKDRIRREE TWRNLERELM RKEEEKRAHD THPNLAYLEQ QVISTPDSTG 300 QQIVGIPQSS DIDLDDQSGQ EKQRLTRWPK HEVQALISLR TAVEPKFLSG ASKLQMWEEI 360 SLGMVSMGFT RTAKKCKEKW QKMYGYFRRA AGSSKQPGEN AKTYPYFQEL DMFYQKCPAE 420 KARDAAIEKA SEGEIDTSSK ELSTSEDQSI FF

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSLTLDLSEE ISPFSVTWRN NKLLDTYQQE PCSSELKSRS DLQSLQKLLP VRNNFTEFTK  60
CSTNYESFPP DLNSDEWFCL SEKQDDGGGG VGGADATGEN HRLGMDSQVR VSSNPEPPLP  120
EIVSRFQDTI QEPKISPMEN EEVAVKATHS DTEFGSDVAG NENVDDDLGE SLCIKKRKRE  180
IQEELKGHFE ELVNKMMNKQ EDMYKVLLER QDDMYKVLLE KIEQKEKHRI TREETWRNLE  240
MERMRKETEQ MEKDRIRREE TWRNLERELM RKEEEKRAHD THPNLAYLEQ QVISTPDSTG  300
QQIVGIPQSS DIDLDDQSGQ EKQRLTRWPK HEVQALISLR TAVEPKFLSG ASKLQMWEEI  360
SLGMVSMGFT RTAKKCKEKW QKMYGYFRRA AGSSKQPGEN AKTYPYFQEL DMFYQKCPAE  420
KARDAAIEKA SEGEIDTSSK ELSTSEDQSI FF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	3e-27	Trihelix family protein