PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390584.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 269aa    MW: 30491.6 Da    PI: 8.2058
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260591.3e-1840134197
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C+ C++ +++C++dC + +yfpa ++ +f +v+ +FG  + l++++++pe+  + a +sl+ +A+ar+ d v+G  g+  +l++++++l+ael 
  XP_026390584.1  40 PCEKCRHNQKRCPADCSYVQYFPAGRRDDFVAVNVVFGSIKFLSVVNEAPEQ--NLASESLIRHARARIADRVNGFSGTAYQLRNRVNELRAELT 132
                     7**********************************************97765..6799***********************************98 PP

          DUF260  96 ll 97 
                     ++
  XP_026390584.1 133 ER 134
                     75 PP
2DUF26062.31.3e-19163260198
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +C aC+++r++C+++C l+ +f  +++++++nv  l+G+ +  + +++++  er+ a++ ++ e++a+ + P +G   +i++l+q++++l   l+
  XP_026390584.1 163 PCGACRHQRKQCPANCSLRAIFTPQRNADLNNVLALYGVPKFKSNMDRVDAAERRLAAERMIQESRAWNEFPGRGFEVLINTLNQEVQRLTRTLE 257
                     7*****************************************************************************************99998 PP

          DUF260  96 llk 98 
                     l+k
  XP_026390584.1 258 LAK 260
                     776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MESEEEEDDI GEQKFFSSRN SSKGYSWFVK ESIFKLEMAP CEKCRHNQKR CPADCSYVQY  60
FPAGRRDDFV AVNVVFGSIK FLSVVNEAPE QNLASESLIR HARARIADRV NGFSGTAYQL  120
RNRVNELRAE LTERGIPIGG DIIPQIEAEQ LEAEQPVVHN GGPCGACRHQ RKQCPANCSL  180
RAIFTPQRNA DLNNVLALYG VPKFKSNMDR VDAAERRLAA ERMIQESRAW NEFPGRGFEV  240
LINTLNQEVQ RLTRTLELAK LPFKKRLGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50510.19e-14LBD family protein