PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390549.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

WOX

Protein Properties

Length: 447aa MW: 49530.9 Da PI: 6.8667

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.3	1.5e-19	66	126	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+t++q+++L++l+++ r p+ae+++++++kl +++ ++V++WFqN++a+e++ XP_026390549.1 66 ARWTPTSDQIRILKDLYYNngVRSPTAEQIQRISAKLtqygKIEGKNVFYWFQNHKARERQ 126 7***************8678***********************************97 PP
2	Wus_type_Homeobox	111.9	3.5e-36	64	128	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_026390549.1 64 TTARWTPTSDQIRILKDLYYnNGVRSPTAEQIQRISAKLTQYGKIEGKNVFYWFQNHKARERQKK 128 679*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEHLHHLQDP QHQMQNFHQL QQQPQQQVQY INIEDSGSGS SSSSNSKNSS SLLCRQNNTS 60 STTTTARWTP TSDQIRILKD LYYNNGVRSP TAEQIQRISA KLTQYGKIEG KNVFYWFQNH 120 KARERQKKRF TLDMAAMQQQ RSSTSSALSN GGNGGTIGVG LNYGGTRGGG NGGGGDGWRH 180 TDLHHPHDYY YAIENNHPTR NIHNPGIPSP TSPPSSHGML TSVGPIGSST ASYGSVLMER 240 RFRECSISAG GSSSIGNSTS NNIGGWVGVH QNHNTNNYHH QEIPTHQYPS NTTTSSSLST 300 YSPAFVEKPS RILPIQLFKE EPDNNNEEEE VAPEIETLPL FPMETGDEDI EIPVVENQTI 360 IPNYFVGSSN SETSNGYLNH NPLTGYYIRS SSSVVVPLHD HHHHHHQEHM NGGINLNRTA 420 SSSLELTLNS YTPITPETVH GRHHQLN

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEHLHHLQDP QHQMQNFHQL QQQPQQQVQY INIEDSGSGS SSSSNSKNSS SLLCRQNNTS  60
STTTTARWTP TSDQIRILKD LYYNNGVRSP TAEQIQRISA KLTQYGKIEG KNVFYWFQNH  120
KARERQKKRF TLDMAAMQQQ RSSTSSALSN GGNGGTIGVG LNYGGTRGGG NGGGGDGWRH  180
TDLHHPHDYY YAIENNHPTR NIHNPGIPSP TSPPSSHGML TSVGPIGSST ASYGSVLMER  240
RFRECSISAG GSSSIGNSTS NNIGGWVGVH QNHNTNNYHH QEIPTHQYPS NTTTSSSLST  300
YSPAFVEKPS RILPIQLFKE EPDNNNEEEE VAPEIETLPL FPMETGDEDI EIPVVENQTI  360
IPNYFVGSSN SETSNGYLNH NPLTGYYIRS SSSVVVPLHD HHHHHHQEHM NGGINLNRTA  420
SSSLELTLNS YTPITPETVH GRHHQLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	4e-28	WOX family protein