PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 145aa MW: 16636.2 Da PI: 6.9801 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 52.5 | 1.1e-16 | 17 | 104 | 13 | 99 |
NF-YC 13 atdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivprd 99 + + + +Pl+rikki+k d+++++i +ea l+s + +lf+ lt +s e+kr+t+k + a +r + + dfl+d p XP_026390171.1 17 SRENLKSVFPLSRIKKIMKIDPEINKINSEALHLVSLSTDLFLQFLTEKSTRVVLEKKRKTIKFEHLRIAAKRHQpTSDFLLDSLPMP 104 33444568**********************************************************998887765389*****99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MAEAVEVVEI EEGEEESREN LKSVFPLSRI KKIMKIDPEI NKINSEALHL VSLSTDLFLQ 60 FLTEKSTRVV LEKKRKTIKF EHLRIAAKRH QPTSDFLLDS LPMPESNPSV GAEPQKRSES 120 HLEKPLPVGT RRIDQFFKKS VVEES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 7e-46 | NF-YC family protein |