PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390066.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 284aa MW: 32079.8 Da PI: 9.4742 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.6 | 1.1e-06 | 130 | 149 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r nL+ H+ XP_026390066.1 130 FSCHICKKTFNRYNNLQMHM 149 89*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MMESSSSSAS SNSIPLEAIT KSQSDAEPNF LTPLKSSLNS DPLEPLPLLN CLLHKPLPTR 60 EPEQKLGFQS IYNQNDEHDD VTLRIGLPNC SSSDVISTKL KGKREKEIVA TDRQYWIPTA 120 AQILIGFTHF SCHICKKTFN RYNNLQMHMW GHGSQYRKGP DSLKGGQPRA VLNLPCYCCT 180 EGCKNNINHP RAKPLKDFRT LQTHYKRKHG VKPFMCRKCG KFLAVKGDWR THEKNCGKLW 240 LCVCGSDFKH KRSLKDHVRA FGTMAHGPAF STSSQGKEEV HLEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 1e-104 | C2H2 family protein |