PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27874.8 Da PI: 10.3044 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.6 | 1.9e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCda+v +iifsstgklye+ss XP_026390010.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCDAQVGLIIFSSTGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 78 | 2.5e-26 | 82 | 170 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++ + +++e+a L+ +++nLq++qR+l+G++L+sLs+keLq+Le+qLe sl+ +R +K++ l+++i+el +k + l++en++L +k XP_026390010.1 82 NATSEGKFWKREAATLRHQLQNLQENQRKLMGQELSSLSVKELQNLENQLEISLRGVRMQKDKKLTDKIHELNRKGNLLHQENMELLNK 170 6788899*******************************************************************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCD AQVGLIIFSS TGKLYEFSST 60 NMKSIIERYN QSKEDQHHPI MNATSEGKFW KREAATLRHQ LQNLQENQRK LMGQELSSLS 120 VKELQNLENQ LEISLRGVRM QKDKKLTDKI HELNRKGNLL HQENMELLNK EHHIRQENMD 180 LLRKINEARD AHETNRISHA PNGFNLEEDE CIKLQLSQPQ QQDYSTPANP RTLSRLKLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 6e-91 | MIKC_MADS family protein |