PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 149aa MW: 17261.8 Da PI: 10.7016 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 7.8e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LC+aev + ifsstgklye+ss XP_026390009.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELSILCEAEVGLTIFSSTGKLYEFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 66.1 | 1.2e-22 | 81 | 147 | 8 | 74 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnelll 74 +++++a+ +++e+a L+ e+++Lq+++R+l+G++L+sLs+ke+q+Le+qLe sl+ +R +K++ l XP_026390009.1 81 INANSEAKFWKREAAALRHELQSLQENHRKLMGQELSSLSVKEIQNLENQLEMSLRGVRMQKDQSLQ 147 378999*********************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELSILCE AEVGLTIFSS TGKLYEFSST 60 NMKSIIERYN KSKEEQHHPV INANSEAKFW KREAAALRHE LQSLQENHRK LMGQELSSLS 120 VKEIQNLENQ LEMSLRGVRM QKDQSLQMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 2e-73 | MIKC_MADS family protein |