PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 234aa MW: 27198.9 Da PI: 9.0667 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.5 | 3.2e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LC+aev ++ifsstgkl e+ss XP_026390006.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELSILCEAEVGLVIFSSTGKLCEFSS 59 9***********************************************96 PP | |||||||
2 | K-box | 76.7 | 6.3e-26 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++a+ +++e+a L+ +++nLq+++R+l+G++L+sLs k Lq+Le+qLe sl+ +R +K++ l+++i+el +k + l++en++L kk XP_026390006.1 82 NANSEAKFWKREAAALRHQLQNLQENHRQLMGQELSSLSAKKLQNLENQLEMSLRGVRMQKDQKLTDEIHELNRKGNLLHQENMELFKKE 171 678999********************************************************************************9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGRGKIVIQR IDNTTSRQVT FSKRRNGLLK KAKELSILCE AEVGLVIFSS TGKLCEFSSP 60 NMKSIIERYN KSKEDQHHPL MNANSEAKFW KREAAALRHQ LQNLQENHRQ LMGQELSSLS 120 AKKLQNLENQ LEMSLRGVRM QKDQKLTDEI HELNRKGNLL HQENMELFKK EHRICQENMD 180 LLRKINEARD ANETNRISHS PNGFNCEEDE CFKLQLCQPQ QQNYATPENP TKPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 1e-91 | MIKC_MADS family protein |