PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389414.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 322aa MW: 36541.6 Da PI: 6.4224

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389414.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48	3.3e-15	36	122	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt+ + +Liea ++ +l+rg+l++++W+ev++ + + f+r+ +qCk++++ ++k+yk +k + s++p+f++l+ XP_026389414.1 36 CWTEGATGVLIEAWGNRYLELNRGNLRQKDWKEVADSVniyhvkqGIKNFSRTDIQCKNRIDTIKKKYKSVKSKPNP------SQWPFFERLH 122 7***************************************99888999*****************998886......68***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MENQKVQGVA HTTTTTTNPR AFHHYNGSAY GGREDCWTEG ATGVLIEAWG NRYLELNRGN 60 LRQKDWKEVA DSVNIYHVKQ GIKNFSRTDI QCKNRIDTIK KKYKSVKSKP NPSQWPFFER 120 LHSLIGANFA PVNKKLASSS SSPQPIHYRP PGMKNPNPNL VMYSGGGMSK KARLDEGEYS 180 DSSEGEGEDE YDDSEGDEEG REEEVEEEAE ELERSGGRKR RGGGEDGGGV GEGYRELAKA 240 VVKFGEMYER IECSKQQQMM ELEKQRMEFT KEIEFQRMQM FMDAQLKVEK RKRPKHSSSA 300 SNGGESLGFD PLLFFSLSSF QF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	224	GGRKRRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05550.1	2e-32	Trihelix family protein