PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389309.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 702aa MW: 80882.4 Da PI: 7.2569

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.8	2.8e-26	84	171	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY +YA+++GFsvrk++s+++ n++i +r f+Cskeg+r ++++ ++r++trt+Cka+l +k+++dg++ v ++ ++HnHel+p XP_026389309.1 84 EFYYRYARSLGFSVRKNSSTHR-ANKTISRRVFCCSKEGFRCPHSRG--PPVKSRPQTRTDCKARLIIKLQDDGRYSVVEFIKKHNHELSP 171 6**************99987.7888************9988..99************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MVADVHHFAR SSHKLMDIQR QEHPLVLNEA AEQLISQNGS QDAHDTMQAS GDFTMSVDFG 60 VSTDFVFETP KLGMVFQSDN HAYEFYYRYA RSLGFSVRKN SSTHRANKTI SRRVFCCSKE 120 GFRCPHSRGP PVKSRPQTRT DCKARLIIKL QDDGRYSVVE FIKKHNHELS PPSEVHTVRS 180 QQKLPHSQAG GLIEDIHLGS IGSPSIYSCT ASLDDAGAQD LNFMQVDCNN YLFRKSRNEI 240 LENGDAQFLL DYFKQKQKDD PYFFYAIRMC SNNQLSSSFW CDAKSRIDYS YFSDVVCFDT 300 TYKLNDCNKP YASFVGVNNH GKFILFGCAL ILDETTESLA WLFGAFLDAM NGKQPKTAFT 360 DPALSLSEAI RQVWPNTHHQ IGLWHIYEEA KKHLADMFEN FKSFKIDFES CIYESETEEE 420 FQSRWNSFIG KYSLAQNEWL QGIYHMREKL GHVYGWEYFC AGLSSDQGSA GMNKFLKKYF 480 KRTIPLHEFV VMYEKVLMIL REKAKHQDSY SRQTKPDLHT MWPAEARASE RYTRKVFLLF 540 QEEYVRTLDL FAEVSDEDGT NFTYKVSSFE NVKPCIVRYD TSDNTVKCSC RKFEFMGILC 600 AHALKVLHSR RLLDIPLQYY LKRWTKDARS GAVVNDDNQS VNLASCSPIT VQRNELAHMA 660 HTLAVKGSTS EKSSAFARRL LTQALEEMDI FLEIDFNQPK ST

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MVADVHHFAR SSHKLMDIQR QEHPLVLNEA AEQLISQNGS QDAHDTMQAS GDFTMSVDFG  60
VSTDFVFETP KLGMVFQSDN HAYEFYYRYA RSLGFSVRKN SSTHRANKTI SRRVFCCSKE  120
GFRCPHSRGP PVKSRPQTRT DCKARLIIKL QDDGRYSVVE FIKKHNHELS PPSEVHTVRS  180
QQKLPHSQAG GLIEDIHLGS IGSPSIYSCT ASLDDAGAQD LNFMQVDCNN YLFRKSRNEI  240
LENGDAQFLL DYFKQKQKDD PYFFYAIRMC SNNQLSSSFW CDAKSRIDYS YFSDVVCFDT  300
TYKLNDCNKP YASFVGVNNH GKFILFGCAL ILDETTESLA WLFGAFLDAM NGKQPKTAFT  360
DPALSLSEAI RQVWPNTHHQ IGLWHIYEEA KKHLADMFEN FKSFKIDFES CIYESETEEE  420
FQSRWNSFIG KYSLAQNEWL QGIYHMREKL GHVYGWEYFC AGLSSDQGSA GMNKFLKKYF  480
KRTIPLHEFV VMYEKVLMIL REKAKHQDSY SRQTKPDLHT MWPAEARASE RYTRKVFLLF  540
QEEYVRTLDL FAEVSDEDGT NFTYKVSSFE NVKPCIVRYD TSDNTVKCSC RKFEFMGILC  600
AHALKVLHSR RLLDIPLQYY LKRWTKDARS GAVVNDDNQS VNLASCSPIT VQRNELAHMA  660
HTLAVKGSTS EKSSAFARRL LTQALEEMDI FLEIDFNQPK ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-125	FAR1 family protein