PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388718.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 239aa    MW: 26803.4 Da    PI: 8.8221
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.83.4e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n++ rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+eyss
  XP_026388718.1  9 KKIDNTTARQVTFSKRRRGLFKKAEELSVLCDAEVALIIFSATGKLFEYSS 59
                    68***********************************************96 PP
2K-box51.64.1e-1881170998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     + + + +  +  +a+L ke+ +  +++R++ Ge+L  L++++LqqLe+ Le +l+++ ++K e ++++i++lq+k  +l een++Lr+++
  XP_026388718.1  81 QPSLELQLENSSYARLSKEVVEKSHQLRQMRGEELRGLNIEDLQQLEKSLEAGLSRVLETKGERIMKEIDTLQRKGCQLMEENERLRHQI 170
                     55556677788899****999999***************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MAREKIQIKK IDNTTARQVT FSKRRRGLFK KAEELSVLCD AEVALIIFSA TGKLFEYSSS  60
SMKDILERHN LHSKNLQKMA QPSLELQLEN SSYARLSKEV VEKSHQLRQM RGEELRGLNI  120
EDLQQLEKSL EAGLSRVLET KGERIMKEID TLQRKGCQLM EENERLRHQI LGKSKSRKEA  180
GGVDSSSQNV VLNEEAGQSS DSVSNVVVCN NSPTSGPPPP PRDYDSSDTS LKLGLPFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-92MIKC_MADS family protein