PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388675.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 775aa MW: 88169.4 Da PI: 6.5885

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	103	2.8e-32	76	169	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g i++r+ vCs++g+r++++++ +++++r+ra+tr+gCka+++vkk+++gkw v+k+++eHnHel+p XP_026388675.1 76 FYNSYARRIGFSTRVSVYHRSRRDGAIICRQIVCSRQGFRHDRDRDgnssESRSKRQRAVTRVGCKAMIMVKKQDSGKWIVSKFVKEHNHELVP 169 9*****************************************999998889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MEFEPLTIDN AVIEFDMGSG EEDGIDIEHP DEEEEDYGDQ IMEGSISQDF FASDLDSNLE 60 PFEGMEFESE EAGRIFYNSY ARRIGFSTRV SVYHRSRRDG AIICRQIVCS RQGFRHDRDR 120 DGNSSESRSK RQRAVTRVGC KAMIMVKKQD SGKWIVSKFV KEHNHELVPP DKVHSLRSHR 180 HVSGPARSLI DTLQAAGIGP SGVMSVLIKE SGGANNVGFT TVDCRNYMSG SKQKTLGTGG 240 QHVLGYLRKM RAENPNFFFA IQGDNDHSTG NILWVDANSR MNYNYFGDTV TFDTTYRTNR 300 YRVPFAPFTG LNHHGQPVLF GCAIILNESE ASFVWLFETW LSVMSGTHPI SITTDQDRVI 360 RAAVSHVFPN TRHRFCRWSI FREAQEKLST VYQSYPNFEA EFRKCVNMTE TIDEFEMCWE 420 TLLQRFGLVE NEWFQSMYLV REQWVPVYLR DTFFGDMSIT QSSDSINSYF DGYINASTTI 480 QILVKQYEKA IASRHEKEVK ADYDTLNTAP VLKTPSPMEK QAASLFTRRM FMKFQEELVE 540 TLAITATKTE DSGTITTYRV AKFGEDHKAY SVSFHVFEMK ASCSCQMFEF SGIVCRHMLA 600 VFKVTNVLTL PSQYVLKRWT RNARSGVVVN ERAVELPNNS RESLTLRFNN LRQEAIKFVE 660 EGAKSLHTYN VAIEALHEVA KKVAAAKGPG IGVGSLVNGS HQEVNASEGN QSGQSQSFTP 720 DEKDKKILEL MNELDTVNQR CEIYRGNLLG VLKYMEEQKL KLSVKVQNVK LNLKD

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MEFEPLTIDN AVIEFDMGSG EEDGIDIEHP DEEEEDYGDQ IMEGSISQDF FASDLDSNLE  60
PFEGMEFESE EAGRIFYNSY ARRIGFSTRV SVYHRSRRDG AIICRQIVCS RQGFRHDRDR  120
DGNSSESRSK RQRAVTRVGC KAMIMVKKQD SGKWIVSKFV KEHNHELVPP DKVHSLRSHR  180
HVSGPARSLI DTLQAAGIGP SGVMSVLIKE SGGANNVGFT TVDCRNYMSG SKQKTLGTGG  240
QHVLGYLRKM RAENPNFFFA IQGDNDHSTG NILWVDANSR MNYNYFGDTV TFDTTYRTNR  300
YRVPFAPFTG LNHHGQPVLF GCAIILNESE ASFVWLFETW LSVMSGTHPI SITTDQDRVI  360
RAAVSHVFPN TRHRFCRWSI FREAQEKLST VYQSYPNFEA EFRKCVNMTE TIDEFEMCWE  420
TLLQRFGLVE NEWFQSMYLV REQWVPVYLR DTFFGDMSIT QSSDSINSYF DGYINASTTI  480
QILVKQYEKA IASRHEKEVK ADYDTLNTAP VLKTPSPMEK QAASLFTRRM FMKFQEELVE  540
TLAITATKTE DSGTITTYRV AKFGEDHKAY SVSFHVFEMK ASCSCQMFEF SGIVCRHMLA  600
VFKVTNVLTL PSQYVLKRWT RNARSGVVVN ERAVELPNNS RESLTLRFNN LRQEAIKFVE  660
EGAKSLHTYN VAIEALHEVA KKVAAAKGPG IGVGSLVNGS HQEVNASEGN QSGQSQSFTP  720
DEKDKKILEL MNELDTVNQR CEIYRGNLLG VLKYMEEQKL KLSVKVQNVK LNLKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein