PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387409.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 652aa MW: 75474.9 Da PI: 7.9337

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.8	3.6e-13	58	142	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y +Y+ + GF+v +++++ + g t+ Cs+e kr +++k+ r ++ ++ t+C+ak++ ++ dg + ++ + l+HnH+l+p XP_026387409.1 58 YYANYGIQQGFRVHRRSTRCD-DYGILRYFTYACSREKKRVSTSKN----RYSNLTSGTNCQAKIRTIMQCDGSFILSVVALDHNHPLTP 142 9***********9987776.88889999******999888....99***********9999**************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MESTRIDMLA VEEEGVCDVN VGNGQCQQGN EQHSEGSEKL EQPKVGMVFS SQDDVYRYYA 60 NYGIQQGFRV HRRSTRCDDY GILRYFTYAC SREKKRVSTS KNRYSNLTSG TNCQAKIRTI 120 MQCDGSFILS VVALDHNHPL TPGETHCFKY KKLDQDAKTR VRQQSRTGDI VQSGVCEKLM 180 VGDKRSRTNY GQVKTSILEE GDAAVLQNFF VKMQTRNSNF FYVMDMDEDC TVRNIFWADA 240 RSRAAYEDFG DVVTLDTSYL RNKFALPLVP FVGVNHHGQP VLLGYALLSN EDVGTFLWLF 300 KSWLACMMGI PPKAIITDQS QAVQKAVQTV FPNVQYRWCL WQVMKKTREK LKGCSQYKAI 360 KISLQNSVCE STSKDEFEDE WRKVIEKYGL HDNEWLKELY VERHRWVPIY TKETFWAGMS 420 TARRSESSCA LFNGHVNSKT TLKQFLEEYD NIIRSKVEKE SRADYESLYS RYDCITHYEI 480 EKQFQEVYTN TKFKEIQEEI MGKLYCYTSL VKEEDSIFVI QVTEHVKVGD NKKDAKFIVN 540 FNAVDCELNC TCHLFKFSGI ICRHTLSVLT QSEVQQVPSK YILSRWRKDI KRKCTFVKAN 600 YKDLDVNPSA QRYDEMCKCF HEIATTSADC KDQSITVMNA LHELKAKIGM PV

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MESTRIDMLA VEEEGVCDVN VGNGQCQQGN EQHSEGSEKL EQPKVGMVFS SQDDVYRYYA  60
NYGIQQGFRV HRRSTRCDDY GILRYFTYAC SREKKRVSTS KNRYSNLTSG TNCQAKIRTI  120
MQCDGSFILS VVALDHNHPL TPGETHCFKY KKLDQDAKTR VRQQSRTGDI VQSGVCEKLM  180
VGDKRSRTNY GQVKTSILEE GDAAVLQNFF VKMQTRNSNF FYVMDMDEDC TVRNIFWADA  240
RSRAAYEDFG DVVTLDTSYL RNKFALPLVP FVGVNHHGQP VLLGYALLSN EDVGTFLWLF  300
KSWLACMMGI PPKAIITDQS QAVQKAVQTV FPNVQYRWCL WQVMKKTREK LKGCSQYKAI  360
KISLQNSVCE STSKDEFEDE WRKVIEKYGL HDNEWLKELY VERHRWVPIY TKETFWAGMS  420
TARRSESSCA LFNGHVNSKT TLKQFLEEYD NIIRSKVEKE SRADYESLYS RYDCITHYEI  480
EKQFQEVYTN TKFKEIQEEI MGKLYCYTSL VKEEDSIFVI QVTEHVKVGD NKKDAKFIVN  540
FNAVDCELNC TCHLFKFSGI ICRHTLSVLT QSEVQQVPSK YILSRWRKDI KRKCTFVKAN  600
YKDLDVNPSA QRYDEMCKCF HEIATTSADC KDQSITVMNA LHELKAKIGM PV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-113	FAR1 family protein