PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387108.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 733aa MW: 84340.3 Da PI: 6.6049

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.7	1.5e-26	82	173	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk +++ks+r++ei r ++Cs++g r+++ k + +++++++ rtgCka++ ++k+k++kw+++++++eHnH+la XP_026387108.1 82 NFYNQYAGKVGFSVRKYSTSKSHRTNEINGRSYCCSRQGARDSRCKPieECLRKSKQTNLRTGCKAMMCIRKRKEDKWVISRIVEEHNHKLA 173 6****************************************99985445566788889****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 733 aa Download sequence
MTDQSLSTDQ AIASYEYDSV DEETTIEFDR VELDDESGKG TIEEYNEAIS NEHRNENFSK 60 DGMSGICPTV GMEFDSVDEA YNFYNQYAGK VGFSVRKYST SKSHRTNEIN GRSYCCSRQG 120 ARDSRCKPIE ECLRKSKQTN LRTGCKAMMC IRKRKEDKWV ISRIVEEHNH KLAGVNERHK 180 LRSIKRIASD QRDMLQKMQQ AGLRSDLMTT FMNLEGRGSS VSSGVIGGEV RKFLSIKQQR 240 ELIEGDIEAI LHYFECQQIE NPAFFHSIQV DSEGQMTNFF WTDARARIDY HYFGDVVYLG 300 SSYGISICGL PFVPILGINH HSQAVLFGAA LLYTESEESL EWVIKTWMMS MNGKQPKVIL 360 TDQDSTVEEV IKRVLPGTHH KYFVCHISES FTKKLPQIIH ANKNFCHDFN NCLHNYETVE 420 EFESNWLAMI KMYNLENDSW LTELFEKREK WAPVYFRGIF CGPKPTSQHR DVFSSFFSGY 480 LKMNTNLLDF LKQYESAVIA RREVEKEEDF ETNHKIRVLR SSMEIEKDAA TVYTRSIFLK 540 FQNELFEGLS HRHKKIEEKG TMSTYYLWKL GHEQAAYTVY FNCLDSSANC SCQLFESAGY 600 LCKHILKIFV VEDVQNLLPQ YILRRWTKDA KIGPLVTDEN EETHSIRNNA VSVRYNKLCQ 660 EALNVAAKGA TSIEAYRVAI TGLHNTLKEV ETMIRCGTLR PAEQNKVDEI GHSYKGSSRS 720 CSDASNNALI QLI

Sequence ? help Back to Top

Protein Sequence Length: 733 aa Download sequence

MTDQSLSTDQ AIASYEYDSV DEETTIEFDR VELDDESGKG TIEEYNEAIS NEHRNENFSK  60
DGMSGICPTV GMEFDSVDEA YNFYNQYAGK VGFSVRKYST SKSHRTNEIN GRSYCCSRQG  120
ARDSRCKPIE ECLRKSKQTN LRTGCKAMMC IRKRKEDKWV ISRIVEEHNH KLAGVNERHK  180
LRSIKRIASD QRDMLQKMQQ AGLRSDLMTT FMNLEGRGSS VSSGVIGGEV RKFLSIKQQR  240
ELIEGDIEAI LHYFECQQIE NPAFFHSIQV DSEGQMTNFF WTDARARIDY HYFGDVVYLG  300
SSYGISICGL PFVPILGINH HSQAVLFGAA LLYTESEESL EWVIKTWMMS MNGKQPKVIL  360
TDQDSTVEEV IKRVLPGTHH KYFVCHISES FTKKLPQIIH ANKNFCHDFN NCLHNYETVE  420
EFESNWLAMI KMYNLENDSW LTELFEKREK WAPVYFRGIF CGPKPTSQHR DVFSSFFSGY  480
LKMNTNLLDF LKQYESAVIA RREVEKEEDF ETNHKIRVLR SSMEIEKDAA TVYTRSIFLK  540
FQNELFEGLS HRHKKIEEKG TMSTYYLWKL GHEQAAYTVY FNCLDSSANC SCQLFESAGY  600
LCKHILKIFV VEDVQNLLPQ YILRRWTKDA KIGPLVTDEN EETHSIRNNA VSVRYNKLCQ  660
EALNVAAKGA TSIEAYRVAI TGLHNTLKEV ETMIRCGTLR PAEQNKVDEI GHSYKGSSRS  720
CSDASNNALI QLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-131	FAR1 family protein