PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026386777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | YABBY | ||||||||
Protein Properties | Length: 208aa MW: 23294 Da PI: 8.174 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 241.1 | 2.4e-74 | 12 | 179 | 3 | 170 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelle.elkveeenlksnvekeesastsv 96 ++ s++vCyv+CnfCntilavsvP ts+f+vvtvrCGhC++llsvn+ sq+l++ ++++ ++ ++ +l +++ nl+ ++++e ++s XP_026386777.1 12 LDVPSGHVCYVHCNFCNTILAVSVPGTSMFNVVTVRCGHCANLLSVNMGSVSQTLPSPPSINHHQDHNNHQyHLLHQNWNLSHDDTSKEYGMASY 106 567899*****************************************************999877666554144555667777788888888888 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + +k s +++e pr+ p irPPekrqrvPsaynrfikeeiqrikasnPdi+hreafs aaknWahfP+ihfgl XP_026386777.1 107 KCNKPSVQNEEPPPRMLP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDITHREAFSSAAKNWAHFPHIHFGL 179 88888999999999*999.9****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MSQQSSSSSS SLDVPSGHVC YVHCNFCNTI LAVSVPGTSM FNVVTVRCGH CANLLSVNMG 60 SVSQTLPSPP SINHHQDHNN HQYHLLHQNW NLSHDDTSKE YGMASYKCNK PSVQNEEPPP 120 RMLPIRPPEK RQRVPSAYNR FIKEEIQRIK ASNPDITHRE AFSSAAKNWA HFPHIHFGLT 180 VDSNKQAAKV DDAFIAGDQG TQKTQQFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-57 | YABBY family protein |