PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026386516.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 297aa MW: 34404.6 Da PI: 6.6871 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.8 | 4.4e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifss+gklyey+s XP_026386516.1 9 KLIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSKGKLYEYCS 59 569**********************************************96 PP | |||||||
2 | K-box | 84.7 | 1.9e-28 | 89 | 174 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + +q++ kLk++ e Lq+++R+l+GedL++Ls++eL+qLe+qLe slk++Rs++++++++++ elq+ke+ l+e+nk+L+kk XP_026386516.1 89 VEDETYQDYLKLKARAEVLQQNNRNLQGEDLGPLSVNELEQLENQLEVSLKQVRSTRTRYMFDHLTELQQKEQLLREANKSLNKKK 174 4567899***************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MGRGRVELKL IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSS KGKLYEYCSS 60 SSMLKTLERY QRNTNSSTSQ SSEIVAFDVE DETYQDYLKL KARAEVLQQN NRNLQGEDLG 120 PLSVNELEQL ENQLEVSLKQ VRSTRTRYMF DHLTELQQKE QLLREANKSL NKKKMDEDKA 180 EIDLQLSWQA GEQRRQQQVD DHRALQLSWQ EGEQRRQQQQ MDEHKAEMAL QWSWQAAEQQ 240 RQIAAYNHHI NAAASERFFQ PLECSPSLQS GLSNASNMMN SAAPVQNLLG FFPGWTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.2 | 3e-65 | MIKC_MADS family protein |