PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386511.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 507aa MW: 59377.9 Da PI: 4.5811

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	48.4	1.2e-15	22	72	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+k +r+ +f +R+ ++lKKA LS + eva+iifss+gkl e+ss XP_026386511.1 22 KRIEDKAQRHLSFYRRKSTLLKKARDLSDDSEDEVALIIFSSEGKLSEFSS 72 79***********************************************96 PP
2	K-box	75.8	1.1e-25	109	192	17	100
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 q++ +Lk++ e Lq++ R+l+Ge+Le+L ++eL qLe+qLe lk++Rs K++ ++ ++ elq+kek+++e+nk+L+kk++e XP_026386511.1 109 AFQDYLQLKARAEVLQQNYRNLQGEGLETLRFEELDQLESQLEVTLKQVRSEKTRSMFGHLAELQQKEKMQREANKTLSKKMAE 192 55899****************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MNNLEIQHQK KKMGRGIKRD IKRIEDKAQR HLSFYRRKST LLKKARDLSD DSEDEVALII 60 FSSEGKLSEF SSTSSMLETL EKYERIKGIL PVSSKPVSEP VVNDIEDEAF QDYLQLKARA 120 EVLQQNYRNL QGEGLETLRF EELDQLESQL EVTLKQVRSE KTRSMFGHLA ELQQKEKMQR 180 EANKTLSKKM AEDNAETALR LSWQVAEQQR QQRMDEDKTD MALELSWQVG EQQRQQIDKD 240 KAEMALQLSW QADEHQRQQQ IDKDKADMAL QLSWQADEQQ RQQQIDNDKA EMARQLSWQA 300 DEQQRQQQID KDKAEMALQL SWQADEQQRQ QQIDKDKAEM ALQLSWQVDE QQRQQQIDKD 360 KAEMALQLSW QVDEQQRQQQ MDEDKAENAL QLSWHAGEQQ WQQQMDADKA ENALQLSWQV 420 GEQQWQQQIN KDKVDIALQS SWQAGEQQRQ VSYNHYTDAV QSECFFQALE CSPSSQVGNN 480 HLSNTGNMMN VTAPAQDLIS FLPGWML

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MNNLEIQHQK KKMGRGIKRD IKRIEDKAQR HLSFYRRKST LLKKARDLSD DSEDEVALII  60
FSSEGKLSEF SSTSSMLETL EKYERIKGIL PVSSKPVSEP VVNDIEDEAF QDYLQLKARA  120
EVLQQNYRNL QGEGLETLRF EELDQLESQL EVTLKQVRSE KTRSMFGHLA ELQQKEKMQR  180
EANKTLSKKM AEDNAETALR LSWQVAEQQR QQRMDEDKTD MALELSWQVG EQQRQQIDKD  240
KAEMALQLSW QADEHQRQQQ IDKDKADMAL QLSWQADEQQ RQQQIDNDKA EMARQLSWQA  300
DEQQRQQQID KDKAEMALQL SWQADEQQRQ QQIDKDKAEM ALQLSWQVDE QQRQQQIDKD  360
KAEMALQLSW QVDEQQRQQQ MDEDKAENAL QLSWHAGEQQ WQQQMDADKA ENALQLSWQV  420
GEQQWQQQIN KDKVDIALQS SWQAGEQQRQ VSYNHYTDAV QSECFFQALE CSPSSQVGNN  480
HLSNTGNMMN VTAPAQDLIS FLPGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-38	MIKC_MADS family protein