PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386133.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 614aa MW: 70033.2 Da PI: 6.3735

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.4	1.8e-24	210	263	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_026386133.1 210 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 263 68*****************.9*****************************8 PP
2	Myb_DNA-binding	37.9	4.1e-12	212	262	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ XP_026386133.1 212 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 262 678***********************************************7 PP
3	Response_reg	80.4	6e-27	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y ev+++ +++al+ll+e++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G XP_026386133.1 35 VLVVDDDPTWLKILEKMLKRCSY-EVTTCCLARDALDLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 127 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el + XP_026386133.1 128 ACDYLLKPVRMKELKN 143 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT 60 TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV 120 MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG 180 NFLSSGKKRK ETENKECDDQ EYSDFSSVKK ARVVWSVDLH QKFVNAVNQI GFDKVGPKKI 240 LDLMNVPWLT RENVASHLQK YRLYLSRLQK PNDPKSSFCG IKQPDFSQKD PPTTFAHKSS 300 SPVLQNTAAN GSFGYTSSNL LVEGAALETH EGDLNGIISF KSVTEPISRK TLNGDVPSPR 360 KANNSQIGFT HSLVLPEQLD VNNISFKANI SQKHSWNREV PIMQMKQLPK QEQKLYGYTH 420 LALPSQPNKI QSESLQPSPS SINLGTSVGE RDKACHLEIK PLHLEDKNDD FKHGFPTAPH 480 ISNPLQADAE NTSPQEFRPI LRINTDLPCM KLQGYNQHCT NTNASTWKPD QRNQIQGNES 540 TSYCSQHESH LGLLQDYLFI EDVELNNIVF MNYHDPDMFA DVPAHLLDKV RFTNDYLCES 600 TLEYPIMDQG LFIA

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MVMDQYHHHH RSMEINNNGY VSSPRSDSFP IGLRVLVVDD DPTWLKILEK MLKRCSYEVT  60
TCCLARDALD LLRERKDGFD IVISDVNMPD MDGFKLLEHV GLEMDLPVIM MSVDGETSRV  120
MKGVQHGACD YLLKPVRMKE LKNIWQHVLR KKIHEVRDIE SYEGNEEILF RNGSERFEEG  180
NFLSSGKKRK ETENKECDDQ EYSDFSSVKK ARVVWSVDLH QKFVNAVNQI GFDKVGPKKI  240
LDLMNVPWLT RENVASHLQK YRLYLSRLQK PNDPKSSFCG IKQPDFSQKD PPTTFAHKSS  300
SPVLQNTAAN GSFGYTSSNL LVEGAALETH EGDLNGIISF KSVTEPISRK TLNGDVPSPR  360
KANNSQIGFT HSLVLPEQLD VNNISFKANI SQKHSWNREV PIMQMKQLPK QEQKLYGYTH  420
LALPSQPNKI QSESLQPSPS SINLGTSVGE RDKACHLEIK PLHLEDKNDD FKHGFPTAPH  480
ISNPLQADAE NTSPQEFRPI LRINTDLPCM KLQGYNQHCT NTNASTWKPD QRNQIQGNES  540
TSYCSQHESH LGLLQDYLFI EDVELNNIVF MNYHDPDMFA DVPAHLLDKV RFTNDYLCES  600
TLEYPIMDQG LFIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-120	ARR-B family protein